Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0444 ATGGCAAAAGCAAATGCTAAGGACACATCCACTTCCACTGCTGGACACCCCCCTTACTTCCATATGATAGCGGATGCCATTTCTACACTGAACGACCGCACGGGTTCAAGCCAGCAAGCAATTGCCAAGTTCATTGAGGATAAACACCACAATCTTCTTCCCCCAAATTTCAGGACATTGCTCTCCGTTCAACTCAGGAAGTTCGTCAAATCGGAGAGGCTCTTCAAGGTCAAGAACTCCTTCAAGATCTCCTCCACCGACAAGTTGAAACTGGCAATTCATGAATCCCGCACAAACAAGAAGATCGCTGAGAAGGATCAGAAGGGTTTGAAAACGAAGAGGCTGAGTCACGTGAAGACGCCGGAGGCTCTCAAGAAGCCCAAACCCAACAAGGGTACAATTACTAAGAAGAAATCGGTGGCCTCTTCCGCAGGGAAAGTGAAGAGTCTGAGTCAGGTTAAGACCCCTGAAGCATTGAAGTCGAAGACGAAGACGAACGCTACCTCCGCGCAGAGGAAGACTACTTCCAAACCCATTGCCTCTTCTAGGCCTGCCAGGAAGGCAAGGAAGTAG 573 0.4921 MAKANAKDTSTSTAGHPPYFHMIADAISTLNDRTGSSQQAIAKFIEDKHHNLLPPNFRTLLSVQLRKFVKSERLFKVKNSFKISSTDKLKLAIHESRTNKKIAEKDQKGLKTKRLSHVKTPEALKKPKPNKGTITKKKSVASSAGKVKSLSQVKTPEALKSKTKTNATSAQRKTTSKPIASSRPARKARK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0444 190 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 15 85 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0444 190 SUPERFAMILY "Winged helix" DNA-binding domain 12 89 IPR036390 -
Sto8g0444 190 PRINTS Histone H5 signature 2 23 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0444 190 PRINTS Histone H5 signature 29 46 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0444 190 PRINTS Histone H5 signature 131 148 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0444 190 PRINTS Histone H5 signature 153 172 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0444 190 MobiDBLite consensus disorder prediction 135 181 - -
Sto8g0444 190 MobiDBLite consensus disorder prediction 100 126 - -
Sto8g0444 190 MobiDBLite consensus disorder prediction 100 190 - -
Sto8g0444 190 Pfam linker histone H1 and H5 family 16 83 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0444 190 Gene3D - 11 108 IPR036388 -
Sto8g0444 190 SMART h15plus2 13 80 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0444 190 PANTHER HISTONE H1 3 187 - -
Sto8g0444 190 PANTHER HISTONE H1 3 187 - -
Sto8g0444 190 CDD H15 13 90 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0444 Sto-Chr8 2757550 2758210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0444 8 93 Single Myb Histone (SMH) Gene Family AT1G72740 37.209 3.45e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0444 K11275 - zju:107426309 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0444 8 2757550 2758210 Sto8g0444 8 2757550 2758210 ECH