Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0424 ATGGAGCTTAAGGAAGAGGAATTTGATCTATCCCAATTTATAGAAGATACAGTTGACTTGTTTCATCCAGTAGCTATAAGGAAAGGTGTAGATCTTGTATTGGACCACTGTGATGGTTCTGTTATCAGATCATATGCACGCGTGAAAGGTGACAGAGGAAAGCTTAAGCAAATCTTGTGTAATTTACTGAGTAATGCTGTTAAATTTACTGATGAGGGACACATAATAGTTCGAGCATGGGCTCAGAAGCCCAATTTTCAGAACTCAATAATCGCTTCTAACAAGTTCAGTTTTATGAAGCGTTTGTCATACTTAtgttacaagaaaaatgaagcaGATATTGATTTAGAAGCTGGGAATTTAGTCCAACAAGATATGAATTGCTTGGAGTTTGTGTTTGAAGTAGATGATACAGGCAAAGGAATTCCTAAAGAGAAGCAAAAGTCAGTGTTTGAGAATTATATTCAAGTCGAAGAAACTGCTCTAGGTCTAGGAGGCACTGGCTTGGGACTTGGTATTGTGCAGTCACTGGTACGTTTAATGCATGGGGATATTAGAATTGTGGACAAGGACATTGGAGAAAAAGGAAGTTGCTTCAGATTCAATGTCATCCTTACAGTGTGTGAGACGATCACTGGTGGTAAGAGCACAAGGAAAGGTAATAATGAAATAGGAGGTGACGGAATTATCAATCAACCTCAGGGACTAGACATTCATACTCCTAGTTCAGGTTCTAGCATTTGTTCCCCGAGTCCCAGATTACCTATTTTCATCTCTAGCAGGCTAGAGGCGTCTCGTGTTGTTCTTTTGATTCAAAACGAGGCGCGTCGAAGGAGTACTCAGAGGTTCATGGAGAGCTTAGGGATTAAAGTGAAGGTTGTGAAGCAGTGGGAAAATTTGTTTCATACTCTCAAGAAGATGAAGCAAAAGGGGAGCTATTCCAGCCAAAGCTCAAAAGGGACAATAGATATGAGTTCTCGATCTACATCTCAAAACTCTAATGGTAGAACCAAAGGGGTTCCTTTGAGTGCTACAGATGGAAAAGATGAGTATACAACTTCTGTTTTTGAAAAGACAGAGGAGGCAGCTAATTCTCTGTGTTTTGTTCTGCTTGTGATTGATGCAATTGCAGGACCTTTTTGGGAACTACGAAGAATGGTAAACGAGTTCAGAAGAGGCCTTGGGAATCCTTGTAAGGTTGTTTGGTTAAATAAGCCACTCATGCGTGGTGTCGATTTGAAAGCAGTTGATGAGGATATATTTGATCCAGATGACATTGTCCTGTCTAAACCATTTCATGGTACTCGTTTACTTCAAGTCATAAGGCTTCTTCCTGAGTATGGTGGTAATTTGCATAGCATATCTGGAAAAGAGTCCAAGGCAAGAAAATCTCCCGTCGATATCGGAGAAATACAAGAATATGgcgattcaagttcaagcaataAGAAACCATTGGGTGGTAGTAAATTTTTAGTTGCTGAGGACACTGAAATTTTACGGAGGATAGCTGTGAAGACTCTGATACAGCTTGGCGCAAATAGTGTTGAGGAATGCAAGAATGGTGAAGATGCTGTGAAGGTCGTTGAAGAGGCTCTAGCTGGGGCCTTTCCGAATCTTCCTTATGATTGCATTTTAATGGATTGTGAGATGCCATTGATGGACGGGTTTGAGGCAACAAGGAGAATAAGGGAGATGGAAAAGAGATATGGTGTTCACATTCCTATCATTGCGCTAACAGCTCATACATCAGGGAGAGAGACAAAAATGACCATAGAGGCTGGAATGGACGTTCATTTAGGCAAGCCACTTAGAAAAGAGAACCTCCTGGAAGCTATCAGATACATACACAGCGAAGAGTGA 1860 0.4005 MELKEEEFDLSQFIEDTVDLFHPVAIRKGVDLVLDHCDGSVIRSYARVKGDRGKLKQILCNLLSNAVKFTDEGHIIVRAWAQKPNFQNSIIASNKFSFMKRLSYLCYKKNEADIDLEAGNLVQQDMNCLEFVFEVDDTGKGIPKEKQKSVFENYIQVEETALGLGGTGLGLGIVQSLVRLMHGDIRIVDKDIGEKGSCFRFNVILTVCETITGGKSTRKGNNEIGGDGIINQPQGLDIHTPSSGSSICSPSPRLPIFISSRLEASRVVLLIQNEARRRSTQRFMESLGIKVKVVKQWENLFHTLKKMKQKGSYSSQSSKGTIDMSSRSTSQNSNGRTKGVPLSATDGKDEYTTSVFEKTEEAANSLCFVLLVIDAIAGPFWELRRMVNEFRRGLGNPCKVVWLNKPLMRGVDLKAVDEDIFDPDDIVLSKPFHGTRLLQVIRLLPEYGGNLHSISGKESKARKSPVDIGEIQEYGDSSSSNKKPLGGSKFLVAEDTEILRRIAVKTLIQLGANSVEECKNGEDAVKVVEEALAGAFPNLPYDCILMDCEMPLMDGFEATRRIREMEKRYGVHIPIIALTAHTSGRETKMTIEAGMDVHLGKPLRKENLLEAIRYIHSEE 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0424 619 Gene3D - 1 211 IPR036890 -
Sto8g0424 619 SUPERFAMILY CheY-like 488 616 IPR011006 -
Sto8g0424 619 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 50 204 IPR003594 -
Sto8g0424 619 PRINTS Bacterial sensor protein C-terminal signature 131 145 IPR004358 GO:0016310|GO:0016772
Sto8g0424 619 PRINTS Bacterial sensor protein C-terminal signature 149 159 IPR004358 GO:0016310|GO:0016772
Sto8g0424 619 PRINTS Bacterial sensor protein C-terminal signature 165 183 IPR004358 GO:0016310|GO:0016772
Sto8g0424 619 ProSiteProfiles Response regulatory domain profile. 489 616 IPR001789 GO:0000160
Sto8g0424 619 Gene3D - 470 618 - -
Sto8g0424 619 SMART HKATPase_4 50 207 IPR003594 -
Sto8g0424 619 MobiDBLite consensus disorder prediction 311 340 - -
Sto8g0424 619 PANTHER HISTIDINE KINASE CKI1 1 616 - -
Sto8g0424 619 CDD REC_hyHK_CKI1_RcsC-like 490 612 - -
Sto8g0424 619 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 616 - -
Sto8g0424 619 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 202 IPR036890 -
Sto8g0424 619 MobiDBLite consensus disorder prediction 311 346 - -
Sto8g0424 619 ProSiteProfiles Histidine kinase domain profile. 1 207 IPR005467 -
Sto8g0424 619 SMART REC_2 488 612 IPR001789 GO:0000160
Sto8g0424 619 Pfam Response regulator receiver domain 491 613 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0424 Sto-Chr8 2644531 2646728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0424 1 618 Histidine Kinase Gene Family AT2G47430 42.920 7.28e-157 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto8g0424 HATPase_c 2.2e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0424 - - qsu:112033262 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0424 8 2644531 2646728 Sto8g0424 8 2644531 2646728 ECH