Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0416 ATGGCTTCTAATCAGCGTCCAGCAAGTTCGGGATCTGATGCGGGAGACCCCAGATCTGAAATCATGGatgagaggaagaggaagaggatgcTGTCTAATCGCGAATCGGCCAGGCGATCAAGGATGAAGAAGCAGAAGCTACTGGAAGATCTGACCAATGAAATCGGCCGATTGCAAAGTGCAAACAGTCAACTACTTGAGAGCATAAGGGAAAAGGAGGAGGCGTACATTGAGATGGAATCTGCCAACAGTGTCCTGAGGGCTCAGACTATGGAGTTGTTCGATCGATTGCGTTTTCTGAATTCAATCCTTGAGATTGCCGAAGAGCCGATCATGGCATCCGCAGACTTCACCCTGCATTGA 363 0.4573 MASNQRPASSGSDAGDPRSEIMDERKRKRMLSNRESARRSRMKKQKLLEDLTNEIGRLQSANSQLLESIREKEEAYIEMESANSVLRAQTMELFDRLRFLNSILEIAEEPIMASADFTLH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0416 120 Coils Coil 34 89 - -
Sto8g0416 120 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Sto8g0416 120 Pfam bZIP transcription factor 25 83 IPR004827 GO:0003700|GO:0006355
Sto8g0416 120 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 110 - -
Sto8g0416 120 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Sto8g0416 120 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Sto8g0416 120 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 110 - -
Sto8g0416 120 MobiDBLite consensus disorder prediction 1 44 - -
Sto8g0416 120 MobiDBLite consensus disorder prediction 17 44 - -
Sto8g0416 120 Gene3D - 23 76 - -
Sto8g0416 120 SUPERFAMILY Leucine zipper domain 25 75 IPR046347 GO:0003700|GO:0006355
Sto8g0416 120 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0416 Sto-Chr8 2595134 2595574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0416 1 109 bZIP Transcription Factor Family AT3G62420 59.091 3.51e-34 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto8g0416 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0416 K25786 - jre:108981706 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0416 8 2595134 2595574 Sto13g3693 13 38945414 38948486 CCT
Sto8g0416 8 2595134 2595574 Sto8g0416 8 2595134 2595574 ECH
Sto8g0416 8 2595134 2595574 Sto13g3693 13 38945414 38948486 ECH