Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0415 ATGTTGGAAGAATTCAGCTTCGACTCTGCTCAGGAAACTAAGGGGCTAAAGGATCAAGGAGTGGCAAGTTCAGAACTTGATGATGAATGCCATAATAAGCGGCAAGTGACACAATCACCTTCTTTAGCATCCTTGAAACTCTTGAGTAATTACGCAAGCAGGTTCAAGAAGCTAAGAATCCAAGACATAACCAACTCAAACAAAAGCCAAGCTTGTGTAGATGGACAAAAGTTGTCAGCTGAAGAGATAGTAAGAGTCGCAGGAGCAAGGTATGTTCAATTCTCTGCTGATTGGTACGATGATTTTAGTATTCCTATGCATCCGTATGACCATGGGTTCGGTGTCGGGGTTCTGTCGGAGGAAGAAAACAGAGATATTGAACTAGCTCAGTTTCTTCTGGCTGCAGCCGAGAGGGTAGGTTGCCATCAATATGAACGTGCAAGCAGATTGCTTCTACATTGTCTATATAATTCATCTCCTAGTGCAAAAGCAGTAGAGAGGGTTATCTTCCACTTCGCCCAAGCACTTGGAGAGAGAATTGAAAAAGAAGCAGGAATGTGTGTTTTAGAGGAATATGATAAAAACATAGAAAATGAGTTGATTCAAAAGTTGGATACCAACATTGCTATTAAATGCCATCAGAAAATCCCTTTCAATCAGGTGATGCAGTTCACTGCTGTACAAGCTATAGTGGAGCATGTTGCATCATATACCAAAATCCATTTTATAGATCTTGATATCAGACGTGGAATACAGTGGACGTGTTTGATGCAGGCGTTGGCAGAGCGAGATGAAAGGCCAGTGGTGCTTCTCAAGATAACTGCTATTGGAATTACCGGGAAAACTGAGATAGAAGAGACTGGTAAAAGATTGGCAAGTTTCGCAAAGTCATTGAATTTGCCATTTTCATTTAAGCAAGTTTTTGTTAGAGACATGGTTGAAATTAGGGAACAACATTTTGAAATTGAAGATGATGAAGTTGTGGCTGTTTATGCTCCGTATATATTGAGGACTATGGTATCAAGGCCTGATTGCTTGGAAAATTTGATGGGTCTAATAAGAAATATGAAGCCAGTGGTAATGATTGTGCTTGAAGTGGAAGCCAATCATAATTCATCCTGCTTTGTGAATCGCTTCGTTGAAGCTTTGTTCTTCTACTCGGCATTTTTCGATTGCATTGAAGCTTGCTTAAAAGAGGAGAATGAGAGCAGAATGACAGTGGAAGTGATATTGACAGAAGGGATACGAAACATTGTTGCAGCGGAAGGCAGAGAGAGAACGGTGAGGAATGTGAAGATAGATGTTTGGAGGAGGTTCTTTGCAAGGTACAGAATGGTGGAACTTGGATTCAGTGAGTCATCTCTGTACCAAGCTAACTTGGTGGCTAAAGAGTTTTCCAAAGGGGATTTTTGCACTTTGCATAAAAATGGGAAATGTCTAATGGTTGGGTGGAAGGGGACCCCAATGCATGCCCTTTCTGCTTGGAGGAGTTCTCATTTGCCTTATGACCTCCTCCATGATTATATTCTTCTCAGGAATTCAATGGCTGGACCAAGGATCGCACACGCTACCTTGAAAGGGCCAAGTGTTGTGAAGGAGTTGTGCATTGGTTTTGCACTTGCTCTTGCTGCTGGTAGTGTCTGGAAGATGTATCACTGGAATGAACAGAGAAAAGTCAGGACCTTTTATGATTTACTGGAAAAAGGAGTTATGGACAATCATGGTCTAAAGCGTATGGGTAAAATACTTTTGACTTGTAATATCTACAGCAGTCCACATCTATTTTTGGCTTATCTGCTATGTGCATTGGTAATTGGTAAATGGTTGGTGGAACAAATCTGCTTGGGACTTGGGAGTGTTTCTTTCCAAACTGGTGTGAGCCTTTCAAGCCCAAGACTTGTGGTCAGGGCATCAGACTCGTCACAAAAGTCCCACACCATTAAATTCCCACGGCTGGTCAACCTAAGGAGCCCAAATAATTTCGGGTCGGGCCGAATTGTTAGGTCAGTCCGACCCGTGCGTGCAGCACCAGAAGGCATATCGGAGAAGGTTGAAGAGAGCATTAAGAAGGCAGAGGAGGCATGCGCAGGTGGTGCGGCCGACGGTGAATGTGCGGCGGCATGGGATGAGGTGGAGGAGCTAAGCGCGGCGGCTAGCCATGCAAGGGACAAGAAGAAAGAGTCCGACCCGCTTGAGGAATTTTGCAAAGACAATCCGGAGACCCGAGAATGCCGGACTGATGATAATTGA 2250 0.4356 MLEEFSFDSAQETKGLKDQGVASSELDDECHNKRQVTQSPSLASLKLLSNYASRFKKLRIQDITNSNKSQACVDGQKLSAEEIVRVAGARYVQFSADWYDDFSIPMHPYDHGFGVGVLSEEENRDIELAQFLLAAAERVGCHQYERASRLLLHCLYNSSPSAKAVERVIFHFAQALGERIEKEAGMCVLEEYDKNIENELIQKLDTNIAIKCHQKIPFNQVMQFTAVQAIVEHVASYTKIHFIDLDIRRGIQWTCLMQALAERDERPVVLLKITAIGITGKTEIEETGKRLASFAKSLNLPFSFKQVFVRDMVEIREQHFEIEDDEVVAVYAPYILRTMVSRPDCLENLMGLIRNMKPVVMIVLEVEANHNSSCFVNRFVEALFFYSAFFDCIEACLKEENESRMTVEVILTEGIRNIVAAEGRERTVRNVKIDVWRRFFARYRMVELGFSESSLYQANLVAKEFSKGDFCTLHKNGKCLMVGWKGTPMHALSAWRSSHLPYDLLHDYILLRNSMAGPRIAHATLKGPSVVKELCIGFALALAAGSVWKMYHWNEQRKVRTFYDLLEKGVMDNHGLKRMGKILLTCNIYSSPHLFLAYLLCALVIGKWLVEQICLGLGSVSFQTGVSLSSPRLVVRASDSSQKSHTIKFPRLVNLRSPNNFGSGRIVRSVRPVRAAPEGISEKVEESIKKAEEACAGGAADGECAAAWDEVEELSAAASHARDKKKESDPLEEFCKDNPETRECRTDDN 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0415 749 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 496 IPR005202 -
Sto8g0415 749 ProSiteProfiles GRAS family profile. 119 496 IPR005202 -
Sto8g0415 749 Pfam CP12 domain 680 747 - -
Sto8g0415 749 SMART CP12_2 680 749 IPR003823 -
Sto8g0415 749 MobiDBLite consensus disorder prediction 1 22 - -
Sto8g0415 749 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 496 - -
Sto8g0415 749 MobiDBLite consensus disorder prediction 715 749 - -
Sto8g0415 749 Pfam GRAS domain family 129 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0415 Sto-Chr8 2583720 2593049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0415 117 496 GRAS Transcription Factor Family AT1G66350 29.659 1.56e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto8g0415 GRAS 5.9e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0415 - - gmx:100791952 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0415 8 2583720 2593049 Sto8g0415 8 2583720 2593049 ECH