Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0408 ATGAATATAAGAGGAAGTAACCTTGTGGCAGAGGGCATTACTTTCAAGAATACGTACTACGACACCTTAGAAGAATTTTACTTTTTGCTTGCTGAAGCTGTGAGAATAGCGGGCGATAAATGTGCATTTTTTGATTGTGCTTTTTTGGGAGTGCAAGACACACTGTTTGATCATCGTGGGCGCCATTACTTCAAAAAGTGCTACATTCAAGGTGGAGTTGATTTCATATATGGGGATGGCCAATCTATCTATGAGGAATgtattattaagttttcaagGGGGAGAGAGGGTCCCCCAGGGAGGGGTGGATGTATCACAGCAAATAGGGGGAGTTCAGATGAAGATAACAGTGCTTTTGTCTTTAAAAATTGTACCATAACTGGGAATGGAAAAGGATTGGCTAGGCTTGGAAGAGCATATGGAAATCACTCGAGTCATCATAGCCAATTCATTTTTAGGCGACGTCGTTGCACCCCAAGACTGGGTGGCTTGGAATGGAGAAACCTAACGTATGTGGAGGAAGGATGCAAGGGACCTGGGGCGGATAAGTCAAAGCGTGTGCCTTGGGTGAAGCACATGAGTACAAGGGAACTTCAACAATTCGTCAACATAGCATTCATCAATCAAGGATTTAGAAACTTCCCACACATTCCTCTTAATTGCTTCACTTAA 672 0.4226 MNIRGSNLVAEGITFKNTYYDTLEEFYFLLAEAVRIAGDKCAFFDCAFLGVQDTLFDHRGRHYFKKCYIQGGVDFIYGDGQSIYEECIIKFSRGREGPPGRGGCITANRGSSDEDNSAFVFKNCTITGNGKGLARLGRAYGNHSSHHSQFIFRRRRCTPRLGGLEWRNLTYVEEGCKGPGADKSKRVPWVKHMSTRELQQFVNIAFINQGFRNFPHIPLNCFT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0408 223 Gene3D - 1 216 IPR012334 -
Sto8g0408 223 PANTHER PECTINESTERASE 6 210 - -
Sto8g0408 223 Pfam Pectinesterase 3 208 IPR000070 GO:0030599|GO:0042545
Sto8g0408 223 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 6 210 - -
Sto8g0408 223 SUPERFAMILY Pectin lyase-like 3 212 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0408 Sto-Chr8 2547443 2548480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0408 1 208 Carbohydrate Esterase AT1G05310 40.000 4.81e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0408 - - cam:101494460 198.749