Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0407 ATGGGTCCTATCAAGAGCATAAGAGTTAGCCAATCTGGTCAATCACAATTCAAAACCATTCAAAGTGCTATTAATACTGTCCCTATGCAGAACTCTCAATGGACTCACATCCAGATTGCCCCTGGCATTTACAGAGAAATGGTgacaattttgaaaacaaaaaattgcaTTTATCTAGAAGGAGCAAGCAGCAATTTGACAATTGTGGAGTCGGATGGCCATATGGATAAACACTTAGAGTTTCCAACTTTAAATTCAAGAGCAGATAACACGGTAGCAAAGGGCATTACTttcaaaaaTACGTATAACGACCCGGCCTTACGGGGAGATGAAAACCATAAAATCCTACCAGCTCTAGCAGCGAGAGTACAAGGCGATAAATGTGCTTTTATTGAATGTGCTTTCCTAGGAGTGCAAGATACAGTGTTTGATCGCAGTGGACGCCATTACTTCCATAAGTGCTACATTCAAGGTGGAATTGATTTCATATTTGGGGATGCTAGATCTATGTATGATGAGTGtactatcatgttttcaatGGGGAAAGAGGGTCCCAAAGATATGGGTGGAGTTATCACTGCAAACAAAAGGAGTTCACCAAAAGATGAGAGTGGATTTGTGTTAAAAAACTCTAACATAACTGGGAATGGAATAGGAAAGCTTACGCTTGGGAGAGGATACGGAGAATACTCAAGGGTCATTATAGCCAATTCATTCCTAGGCGATGTCGTTTCACCCCAGGGTTGGGTTGCTTGGAATGGAGCTAGCCACGAggGAAACCTTACGTATGTGGAAGAGGGGTGTACGGGACCAGGGGCTGATAAGTCGAAGCGCGTACCATGGATGAAGCACTTGAGTGGAAACCAGCTTCAACAATTCACCGATATAAAATTATTCATCGATCCAGAAGGATGGATTTCCAAACTTCCAATACAACATTCTTAA 945 0.4042 MGPIKSIRVSQSGQSQFKTIQSAINTVPMQNSQWTHIQIAPGIYREMVTILKTKNCIYLEGASSNLTIVESDGHMDKHLEFPTLNSRADNTVAKGITFKNTYNDPALRGDENHKILPALAARVQGDKCAFIECAFLGVQDTVFDRSGRHYFHKCYIQGGIDFIFGDARSMYDECTIMFSMGKEGPKDMGGVITANKRSSPKDESGFVLKNSNITGNGIGKLTLGRGYGEYSRVIIANSFLGDVVSPQGWVAWNGASHEGNLTYVEEGCTGPGADKSKRVPWMKHLSGNQLQQFTDIKLFIDPEGWISKLPIQHS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0407 314 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 311 - -
Sto8g0407 314 Pfam Pectinesterase 7 297 IPR000070 GO:0030599|GO:0042545
Sto8g0407 314 PANTHER PECTINESTERASE 5 311 - -
Sto8g0407 314 SUPERFAMILY Pectin lyase-like 7 309 IPR011050 -
Sto8g0407 314 Gene3D - 4 314 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0407 Sto-Chr8 2543415 2544696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0407 5 258 Carbohydrate Esterase AT2G19150 42.126 4.89e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0407 - - cam:101494460 359.377