Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0398 ATGGAGAAGAAGGAGATGGGTGTGAAGACAGAGGAAGCAATTGGATCCTCTTCATTTTCATCGGCTTTTGATTTCTGTGAAGTGGAAAAGAGCTCGCTAGGGTTTATGGAGTTACTAGGTGTGCACGATTATAGTGCTCTGCTTGGATGGTCGTCAATTCCTGACTCTTCTAGTATTCTCAAACATCTATCTGACACTGGCAACGAGTGTTCCGAGGTGTTGAATCAACAACCTGCCACTCCCAACTCTTCATCCATATCCTCCACATCCACTGAACCTCTCAATGATGAACACAATAAAACTGTGGACCAATCACAACAACACTCCAACACCAACAAACTGTTGAAACCCAAGAAGACAAATCAGAAGAGACAGAGAGAGCCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGACCATTTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGgAGCTATTATCGTTGCACCAGCGCTTCGTGTAATGTGAAGAAACGAGTAGAACGATCATTTACTGATCCAAGCGTTGTAGTGACAACCTACGAAGGCCAACACACCCATCCAAGCCCAGTCATGCCTCGCTCAGCTCTCGCCGGAGTCGGCGCTTCACTACCGGCAGGTATCTCCGCCGCCGGATGTGCCTCCTCCTTTGGTTCACTAATGGTAGCTGGAAGCCTGTATCATCAGCCCCAACAACATCAACTACTTGTTAACAACAATGCATTATCGTCTATGGCCTTTCCTACCAATTTTCAAAGTATTGATTCAACTTCAAAGAACGCTGCTTTTACTTTTGCTCAAGACAGAAGAGCCACTGCTGCTTTTCTAAGTGATCATGGGCTTCTTCAGGACATTCTTCCTTCCCATATGTTGAAAGAAGAGTAG 918 0.4586 MEKKEMGVKTEEAIGSSSFSSAFDFCEVEKSSLGFMELLGVHDYSALLGWSSIPDSSSILKHLSDTGNECSEVLNQQPATPNSSSISSTSTEPLNDEHNKTVDQSQQHSNTNKLLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSALAGVGASLPAGISAAGCASSFGSLMVAGSLYHQPQQHQLLVNNNALSSMAFPTNFQSIDSTSKNAAFTFAQDRRATAAFLSDHGLLQDILPSHMLKEE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0398 305 SMART WRKY_cls 141 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0398 305 ProSiteProfiles WRKY domain profile. 136 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0398 305 SUPERFAMILY WRKY DNA-binding domain 133 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0398 305 Gene3D WRKY domain 126 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0398 305 MobiDBLite consensus disorder prediction 72 128 - -
Sto8g0398 305 PANTHER WRKY TRANSCRIPTION FACTOR 12 297 - -
Sto8g0398 305 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 297 IPR044810 GO:0003700
Sto8g0398 305 PIRSF WRKY_txn_fact_IIc 1 305 IPR017396 GO:0003700
Sto8g0398 305 MobiDBLite consensus disorder prediction 72 95 - -
Sto8g0398 305 Pfam WRKY DNA -binding domain 142 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0398 Sto-Chr8 2508142 2509475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0398 24 305 WRKY Transcription Factor Family AT2G47260 49.371 2.00e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto8g0398 WRKY 1.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0398 - - aprc:113872234 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0398 8 2508142 2509475 Sto13g3718 13 39081245 39082635 CCT
Sto8g0398 8 2508142 2509475 Sto8g0398 8 2508142 2509475 ECH