Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0385 ATGGAGTACGAGGGTGAGGGTGTTCCCATGAGTATGAGCACAAGTTGTTCATCATCAACGGCGACGAATGGTAGTGAAGAAGAGACAGTAACCATAAAGAAAGGTCCATGGACGGAGGAAGAGGATTCCGTTCTGGTGAACTACGTCAGCCTCCACGGCGAAGGTCTAAAGCGAACGGGTAAAAGCTGCAGATTAAGATGGTTAAACTACTTGCGTCCAAATGTTCGGCGTGGGAATATCACCCTCCAAGAACAGCTCTTGATTCTCCAACTCCATTTCCGCTGGGGCAATCGGTGGTCGAAAATCGCGCAACACTTGCCAGGCAGAACAGACAACGAGATCAAAAACTATTGGAGGACCAGAGTTGTGAAGCAGGCTAAGCAACTCCGATGTGACGTTAATAGCAAGCAGTTCAGAGACGCCTTGCGTTTCGAGTGGATGCCTCGCCTCCTCGAGCGCATCCAGGcctcatcttctccttctttccaGGCCCAgccccaagcccaagcccacaGCTACGACTTTTATTCTGAGTCTGCAGCACCACTCTTGGTTGATGTCCAAGATCCCTCTCTCTCAGACTCCAGCGTTTGTTACAATTTGACAAGGGGTGATGATGTTACTCTCACACAACAAGGACACGTGGAATCTTGGGGGATGCAAGCATTTGATGCAAACCATAATGCTTTAGGTGTTGCTGATATGTGGACAGATGAAAATATATGGTTCTTGCAGCAACAACTATGTGATGACATTTAA 759 0.4532 MEYEGEGVPMSMSTSCSSSTATNGSEEETVTIKKGPWTEEEDSVLVNYVSLHGEGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILQLHFRWGNRWSKIAQHLPGRTDNEIKNYWRTRVVKQAKQLRCDVNSKQFRDALRFEWMPRLLERIQASSSPSFQAQPQAQAHSYDFYSESAAPLLVDVQDPSLSDSSVCYNLTRGDDVTLTQQGHVESWGMQAFDANHNALGVADMWTDENIWFLQQQLCDDI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0385 252 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 19 244 - -
Sto8g0385 252 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 244 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sto8g0385 252 SMART sant 33 73 IPR001005 -
Sto8g0385 252 SMART sant 76 124 IPR001005 -
Sto8g0385 252 Pfam Myb-like DNA-binding domain 34 71 IPR001005 -
Sto8g0385 252 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Sto8g0385 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 71 IPR017930 -
Sto8g0385 252 ProSiteProfiles Myb-like domain profile. 29 122 IPR001005 -
Sto8g0385 252 Gene3D - 31 77 - -
Sto8g0385 252 Gene3D - 81 122 - -
Sto8g0385 252 CDD SANT 36 120 IPR001005 -
Sto8g0385 252 SUPERFAMILY Homeodomain-like 32 118 IPR009057 -
Sto8g0385 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Sto8g0385 252 MobiDBLite consensus disorder prediction 10 29 - -
Sto8g0385 252 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0385 Sto-Chr8 2444780 2445740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0385 25 251 MYB Transcription Factor Family AT2G47190 49.412 3.80e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g0385 Myb_DNA-binding 9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0385 K09422 - gmx:547458 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0385 8 2444780 2445740 Sto8g0385 8 2444780 2445740 ECH