Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0384 ATGGATGGTAAGATGAAAGGAGGATGTGCAGAAAATCATCAAAGTGAAGACAACACGAGCATCAGGAAAGGTCCATGGACCGTTCAAGAGGACACCATTCTTGCCAATTACATAGCCACCCACGGTCTCAAGAGAACGGGGAAGAGTTGCAGATTAAGATGGCTAAACTACTTGCGTCCCGATGTTCGGCGAGGAAATATCACACTCCAAGAACAGATACTGATTCTGGACCTCCATTCTCGCTGGGGAAATAGGTGGTCTAAAATTGCGCAGTACTTGCCAGGAAGAACGgacaatgaaattaaaaattattggagaaCCAGAGTGATAAAGCAAGCCAAGCAACTCGAGTGTGACGTCAACAGCAAAAGGTTCAGAGACGCCATGCGTTACGTCTGGATGCCCCGACTGCTCGAACAGATCCGGACATCATCCGAACACGACCCGACCCGGAAACATCCACAGGCTTCGGGAGAAACCGAGTGCGTTAGCGTAAACCCAAATTACTCGTCCACCACTTCGGAGCTCCAGCTTGGTTCGGATTTGGAGACAGCGGGTCATCCAAAGGGGTGGGTTACCCAAATGTCAGAGCAGGGAAATTGcgtgggtggtggtggggacTCACTGGAGAATCTTTGGAACGATGAGAATATATGGTTTTTACAGCAACAACTTTGCGATTGA 684 0.4576 MDGKMKGGCAENHQSEDNTSIRKGPWTVQEDTILANYIATHGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVIKQAKQLECDVNSKRFRDAMRYVWMPRLLEQIRTSSEHDPTRKHPQASGETECVSVNPNYSSTTSELQLGSDLETAGHPKGWVTQMSEQGNCVGGGGDSLENLWNDENIWFLQQQLCD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0384 227 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 168 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sto8g0384 227 MobiDBLite consensus disorder prediction 157 176 - -
Sto8g0384 227 PANTHER MYB TRANSCRIPTION FACTOR 1 168 - -
Sto8g0384 227 MobiDBLite consensus disorder prediction 143 176 - -
Sto8g0384 227 Gene3D - 68 109 - -
Sto8g0384 227 Pfam Myb-like DNA-binding domain 23 58 IPR001005 -
Sto8g0384 227 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
Sto8g0384 227 Gene3D - 20 64 - -
Sto8g0384 227 ProSiteProfiles Myb-like domain profile. 18 109 IPR001005 -
Sto8g0384 227 CDD SANT 68 107 IPR001005 -
Sto8g0384 227 MobiDBLite consensus disorder prediction 1 22 - -
Sto8g0384 227 CDD SANT 25 58 IPR001005 -
Sto8g0384 227 SUPERFAMILY Homeodomain-like 20 105 IPR009057 -
Sto8g0384 227 SMART sant 22 60 IPR001005 -
Sto8g0384 227 SMART sant 63 111 IPR001005 -
Sto8g0384 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0384 Sto-Chr8 2436692 2437577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0384 16 226 MYB Transcription Factor Family AT2G47190 48.627 1.07e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g0384 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0384 K09422 - rcu:8267295 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0384 8 2436692 2437577 Sto13g3727 13 39136341 39137158 CCT