LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0378	ATGGAAAAAGAAACTTTTGTACCTTTTCAAGGCATCAAGAATGATCTCAGAGGAAGGCTAATGTGCTACAAGCAAGATTGGAGTGGTGGAATCAGAGCAGGCTTAAGGATTTTGGCCCCCaccacatatatattttttgcctCCGCAATACCTGTCATTTCATTTGGTGAACAACTGGAGCGTAATACTGATGGAGTTCTAACAGCTGTTCAAACCTTGGCATCCACTTCAATTTGTGGCATTATACACTCAATCCTTGGCGGTCAACCTCTACTGATTTTAGGAGTTGCAGAGCCTACCGTCATCATGTATACCTTCATGTTCAATTTTGCTAAAGAGAGGCCAGAGTTGGGTCGGAATCTATTTCTAGCATGGACTGCATGGGTATGTGTGTGGACTGCACTATTGCTATTCCTAATGGCCATCTTAGGAGCTTGCTCCATCATCAATAGATTTACACGTCTTGCAGGAGAGTTATTTGGCCTTCTCATTGCAATTCTCTTCATGCAGCAAGCTATCAAAGGACTTGTGGATGAGTTTCGCATTCCAAAGCGAGAAAATCCAAACTCAGTTGAGTTTTTACCCTCATGGAGGTTTGCTAATGGCATGTTTGCTTTAGTCCTCTCATTTGGCCTTCTCCTTACTGCACTAAGAAGCAGAAAGGCTAGGTCATGGCGTTATGGGACTGGTTGGCTTCGCAGCCTAATAGCAGACTATGGTGTACCACTTATGGTCCTAGTTTGGACAGGTGTGTCCTACTTACCATCTGAAAGTGTTCCACATGGCATCCCTAGACGCCTCTTCAGCCCAAATCCATGGTCACCTGGTGCATACGAGAATTGGACTGATATGGTACATGTTCCTATTTCCTACATAATCGGAGCTTTTGTTCCAGCAACCATGATTGCTGTGCTATATTACTTTGATCACAGTGTGGCATCCCAACTTGCCCAACAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGATTTGCTGCTGTTGGGTTTTCTGACTTTAATGTGTGGCCTTATTGGAATCCCTCCTGCAAATGGAGTCATACCGCAGTCACCCATGCATACAAAAAGCTTGGCAACTCTTAAACACCAGCTGCTACGTAACAGACTAGTGGTAACAGCACGAAAAAGCATTAATAAAAATGCCAGTTTAGGACAGTTATATGGCAATATGCAAGAAGTCTACTATCAAATGCAAACACCTCTAACATACCAGGACCCTTCTGCTCGAgCACAAGGACTAAGAGAATTAAAAGAATCAACCATACAAGCAGCTACTGGTATGGGAAACATGGATGCACCAGTAGATGAAACTATATTTGATGTGGAGAAGGATATAGACGATCTTTTGCCTGTGGAGGTGAAAGAACAGCGTCTAAGTAACTTGCTTCAAGCAACAATGGTGGGAGGATGTGTTGCAGCCATGCCTTTCCTCAAGAAGATTCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCCATTGAGAGTTTGCCTGGTAACCAATTCTGGGAAAGGATCTTATTACTCTTCACTGCACCCAGCAGAAGATACAAGGTGCTTGAGGATTACCATGCTACTTTTGTGGAAACAGTCCCTTTCAAGACAATTGCAACATTCACTATTTTTCAAACTGTTTATCTGCTAGTATGCTTTGGATTAACTTGGGTCCCTATTGCTGGCCTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCAGTAAGACAGTACTTCCTCCCCAAGTTTTTCAAAGGGGCACACCTTCAAGACTTGGATGCAGCAGAGTACGAAGAGCAACCTGCTCTACCATACAACCTTGCAACGCAATCAGAGTTTGGTGCTGGAGCTTCACATTTGGGAGAAGGAGAGATAATGGATGAAGTAATTACTAGAAGCCGTGGAGAGATTAGGCATACTAGTAGTCCAAAGATTACAAGCTCCACCCCAACATCAGCAAATGATGCCAAAAGCCATCAGAGCCCACGTCTCTCAACTGAGCAAAGTCCCAAGTATGGTGTAAGAGGCACCTATAGTCCAAAGACCAGAGAAGCGAGGTTATCAAATCTGGGAAGAAGTCCTCTTAACCCAGAATTGAAGAAGCAGGACAAGAAATGA	2139	0.4329	MEKETFVPFQGIKNDLRGRLMCYKQDWSGGIRAGLRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWTAWVCVWTALLLFLMAILGACSIINRFTRLAGELFGLLIAILFMQQAIKGLVDEFRIPKRENPNSVEFLPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYLPSESVPHGIPRRLFSPNPWSPGAYENWTDMVHVPISYIIGAFVPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVVTARKSINKNASLGQLYGNMQEVYYQMQTPLTYQDPSARAQGLRELKESTIQAATGMGNMDAPVDETIFDVEKDIDDLLPVEVKEQRLSNLLQATMVGGCVAAMPFLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTVYLLVCFGLTWVPIAGLMFPLMIMLLVPVRQYFLPKFFKGAHLQDLDAAEYEEQPALPYNLATQSEFGAGASHLGEGEIMDEVITRSRGEIRHTSSPKITSSTPTSANDAKSHQSPRLSTEQSPKYGVRGTYSPKTREARLSNLGRSPLNPELKKQDKK	712

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g0378	712	MobiDBLite	consensus disorder prediction	647	682	-	-
	Sto8g0378	712	Pfam	HCO3- transporter family	8	181	IPR011531	GO:0006820\|GO:0016021
	Sto8g0378	712	Pfam	HCO3- transporter family	460	550	IPR011531	GO:0006820\|GO:0016021
	Sto8g0378	712	Pfam	HCO3- transporter family	203	371	IPR011531	GO:0006820\|GO:0016021
	Sto8g0378	712	PANTHER	ANION EXCHANGE PROTEIN	3	691	IPR003020	GO:0005452\|GO:0006820\|GO:0016020
	Sto8g0378	712	PANTHER	BORON TRANSPORTER 2-RELATED	3	691	-	-
	Sto8g0378	712	MobiDBLite	consensus disorder prediction	643	712	-	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0378	Sto-Chr8	2411016	2414208	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g0378	3	683	Antiporters	AT3G62270	82.029	0.0	1150

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0378	K24194		-	gmx:100776705	1290.02

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g0378	8	2411016	2414208	Sto8g0378	8	2411016	2414208	ECH

Showing 1 to 1 of 1 entries