Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0367 ATGGATGCTAGATTTGGCACAGAAGCTTTTCACTTGTATGGTATGGGTTCTTCGGATTTGCGGGCCGTGGGAAAGAGGTCCATGGAATGGGATTTGAACGATTGGAAATGGGATGGCGATCTATTTATAGCTAGCCCGCTGAATCCATTGCCAGCAGATAGTATAGGCCGACAACTTTTCCCTCTTGGGTCTGGGATCCCCATGGCCGGTGGGTCCTCCAACAGTTCTTCCTCATGCTCCGATGAAGTAAATCTTGAGACTGacaagaggaagaaggaaggaGAGAGGAAAAGGAGGGTAATTGTGGTCGAGGAAGACAGTTTGAACGAGGAAGCAGGTAACCTTAGCTTAAAGCTTGGGGGACATGATTCTCCAGCTGCTAATAGGGAGATAGCAAGTTGGGAAGGAACTAATGGGAAGAAAACCAGATTAGCTGGAGGTACTTCGAATCGAGCTGTTTGTCAGGTGGAGGACTGTGGTGCAGATCTGAGCAGTGCTAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCACTCAAAGGCCAGTAGGGCACTTGTGGGGAATGTGATGCAGCGGTTCTGTCAGCAATGTAGTAGGTTTCACATCCTTCAGGAGTTTGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCAGGCCATAACAAAAGAAGGAGGAAAACAAATAATGATGCTGTTCCTAATGGAACTCCGCCAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATACTTTCAAATATGCATTCTAACAGGTCAAATCAGAACACAGATCAGGATCTGCTATCTCATCTTCTTAGGAGCCTAGCTAGTCAAAATGGTGAACACGGCGGCAAGAACTTGTCTAACCTTCTGCGGGAAccagaaaattttttgaaagaagGGAGTTCTCCTGGGAAATCAGAAATGGTTTCTACTTTATTCTCACATGGTTCTCAAGGCTCTCCAACAGTTATAAGACAACCACAAACAATATCTCTGACTGAAATTCAACAAGAAGGAATGCATGGTGCTAGGGCTGCCGATCAGCAAACCTTGTCTTCTACTAAACCTAGCATTTCAAACAGTCCTCCAGCTTACTCAGAAGCCAGAGACAGTATAGCTGGACAGGTCAAGATGAATAATTTTGATTTGAATGACATATATGTTGACTCAGATGATGGCATGGAAGATATAGAAAGATTGTCTGTCTCTACAAACCTTGCGGTTAGTTCTCTTGATTACCCATGGGCACAAGACTCTCATCAGTCAAGTCCACCACAAACAAGTGGAAACTCATATTCTGCATCTGCTCAGTCCCCTTCTAGTTCAAGTGGAGAAGCGCAGAGCCGCACAGATCGAATTGTTTTTAAACTCTTTGGTAAAGAACCAAATGATTTGCCTCTTGAACTTAGAGCACAGATTCTTGACTGGTTATCCCACAGTCCAACTGACATCGAGAGCTACATAAGGCCTGGATGTATTGTTTTGACTATCTATCTGCGTCAGCCTGAGGCTGTGTGGGAGGAACTTTGCTATGATCTGACTTCGAGTTTGAATAGGCTTCTGGGTGTCTCAGATGGTGGTTTCTGGAGTACTGGATGGGTTTACACAAGGGTGCAACATCAGATAGCCTTCATTTTCAATGGTCAGGTTGTCATAGATACATCCTTACCTCTCAGAAGTAACAATTATAGTAAAATTTTGTGTGTTAGTCCAATTGCTGTACCAGCATTCAAAAGAACTCGATTTTCTGTCAAGGGTATTAATCTGAATCGCTCAGCCACTAGGTTATTATGTGCTCTAGAAGGGAAATATCTGGTCTGTGAAGATGCTTGTGAGTCAATGGAGCAGTCCTCCGAAGAGTTTGATGAGCTACTGTGCGTCCAATTTTCATGCTCTGTCCCTGAAATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCATTCATAGTTACGGAGGAAGATGTTTGCTCAGAAATCTGTGCGCTTGAGCCACTATTAGAATCAGGCAAAGATGATTCTGATATTGGAGAATCTGGAAAAATTCTAGCAAGAAGTCAAGCCATGGATTTTGTTCATGAAATGGGTTGGCTTATCCATAGAAGCCAATTGAAATCTAAGATGGTTCTCCTAAACTCCAGTGTGGATCTTTTTCCATTAAAACGGTTCAAGTGGCTTATGGAGTACTCTATGGACCATGATTGGTGTGCAGTGGTGAAGAAACTATTGAACCTGCTACTTGATGGAACTGTAGATGCTGGAGATCACCCTTCCCTGTATTTTGCACTTTCTGAAATGGGTCTCCTACATAAAGCTGTAAGGAGAAATAGCAAGCAGTTGGTGGAGTTTCTTTTGAGATATGTCCCTGAGAATGTTTCTGATAAACTAGGACCTGAAAACAAGGCACTGATTGACGCTGGGAACCAGAGCTTCTTGTTTAGACCTGACGTTGTTGGTCCTGCAGGTTTGACGCCACTGCACATTGCAGCTGGGAAAGATGGTTCCGAGGATGTTTTGGATGCTTTAACTAATGATCCTTGCATGGTGGGAATTGAAGCATGGAAGAGTTCCCGTGACAGCACAGGCTCAACACCTGAAGATTATGCACGCCTACGTGGCCATTATGCTTACATTCACCTGGTGCAGAAGAAAATCAACAAGAGACAAGCAGCAACAGCAGCTCATGTGTTCGTAGATATCCCCAGCAATCTGACTGACTGCAGTACAACTACAAACCAGAAGCAAACTGAGTCATCTGCTAGCTTTGAGATTGCAAAGGTTGAAGGAAGCCGAAAGCAAGGGCAGTGCAAACTTTGCGATCATAAATTGTCTTGTAGAACTGCGGTTGGAAGGTCTTTGGTATACAAACCTGCCATGCTCTCAATGGTGGCCGTAGCAGCAGTCTGTGTCTGCGTGGCCCTTCTGTTTAAAAGCTCGCCCGAAGTTCTCTGTGTCTTCCAACCCTTCAGGTATGACAGGCTTAATGACATGCTCCTTAAGATCAGCAGCAATTTGATCATTAGTGACAGTCTCATCATGCTGGGTGGAAATGAGAACGGTGTGCACGCGGACTGGGACCATAGCACCGTTGTCATTGTACTTGGTTGCAAGGACATGGCTCAGAGGCATGTACTCGGGAGTTTCGTCAGTGGCATACCCAAACATGTGACCCTGGTCACCAGCACCTACCTCCTCTGGGCGCTTGGTAAAGTGGCCATGGACGCCCTGGGCAATATCAGGGCTCTGCTGCTCAATGTTGACCAAGACCTTGCATTTGTCAGCATCAAGACCCACATCATCTGA 3342 0.4434 MDARFGTEAFHLYGMGSSDLRAVGKRSMEWDLNDWKWDGDLFIASPLNPLPADSIGRQLFPLGSGIPMAGGSSNSSSSCSDEVNLETDKRKKEGERKRRVIVVEEDSLNEEAGNLSLKLGGHDSPAANREIASWEGTNGKKTRLAGGTSNRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGTPPNDDQTSSYLLISLLKILSNMHSNRSNQNTDQDLLSHLLRSLASQNGEHGGKNLSNLLREPENFLKEGSSPGKSEMVSTLFSHGSQGSPTVIRQPQTISLTEIQQEGMHGARAADQQTLSSTKPSISNSPPAYSEARDSIAGQVKMNNFDLNDIYVDSDDGMEDIERLSVSTNLAVSSLDYPWAQDSHQSSPPQTSGNSYSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDLPLELRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQPEAVWEELCYDLTSSLNRLLGVSDGGFWSTGWVYTRVQHQIAFIFNGQVVIDTSLPLRSNNYSKILCVSPIAVPAFKRTRFSVKGINLNRSATRLLCALEGKYLVCEDACESMEQSSEEFDELLCVQFSCSVPEMNGRGFIEIEDQGLSSSFFPFIVTEEDVCSEICALEPLLESGKDDSDIGESGKILARSQAMDFVHEMGWLIHRSQLKSKMVLLNSSVDLFPLKRFKWLMEYSMDHDWCAVVKKLLNLLLDGTVDAGDHPSLYFALSEMGLLHKAVRRNSKQLVEFLLRYVPENVSDKLGPENKALIDAGNQSFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKSSRDSTGSTPEDYARLRGHYAYIHLVQKKINKRQAATAAHVFVDIPSNLTDCSTTTNQKQTESSASFEIAKVEGSRKQGQCKLCDHKLSCRTAVGRSLVYKPAMLSMVAVAAVCVCVALLFKSSPEVLCVFQPFRYDRLNDMLLKISSNLIISDSLIMLGGNENGVHADWDHSTVVIVLGCKDMAQRHVLGSFVSGIPKHVTLVTSTYLLWALGKVAMDALGNIRALLLNVDQDLAFVSIKTHII 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0367 1113 MobiDBLite consensus disorder prediction 352 372 - -
Sto8g0367 1113 SUPERFAMILY SBT domain 152 232 IPR036893 GO:0003677|GO:0005634
Sto8g0367 1113 MobiDBLite consensus disorder prediction 218 244 - -
Sto8g0367 1113 MobiDBLite consensus disorder prediction 302 330 - -
Sto8g0367 1113 MobiDBLite consensus disorder prediction 421 454 - -
Sto8g0367 1113 MobiDBLite consensus disorder prediction 68 82 - -
Sto8g0367 1113 Gene3D - 752 910 IPR036770 -
Sto8g0367 1113 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 16 1007 - -
Sto8g0367 1113 SUPERFAMILY Ankyrin repeat 768 892 IPR036770 -
Sto8g0367 1113 MobiDBLite consensus disorder prediction 310 330 - -
Sto8g0367 1113 Gene3D - 145 215 IPR036893 GO:0003677|GO:0005634
Sto8g0367 1113 MobiDBLite consensus disorder prediction 343 374 - -
Sto8g0367 1113 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Sto8g0367 1113 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 16 1007 IPR044817 GO:0003677
Sto8g0367 1113 MobiDBLite consensus disorder prediction 66 95 - -
Sto8g0367 1113 Pfam SBP domain 154 227 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0367 Sto-Chr8 2337639 2346983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0367 24 1007 SBP-box Gene Family AT3G60030 56.088 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sto8g0367 SBP 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0367 - - gmx:100809806 1568.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0367 8 2337639 2346983 Sto8g0367 8 2337639 2346983 ECH