Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0366 ATGAGTTGTTTCAGCTGTTGTGAAGAGGATGACCTCCACAAAGCTGCTGAGAGTGGTGGACCATATGTGGCAAAAAATTCAGCTGTAAATGATGGGAATTATCATGCTTCCGAAATTGCAAAGCAGGGTGCCCAGTCTGCTAAAAACCAGCCCATAGAAGTTCCTGCTATATCAGTTGAAGAACTAAAAGAAATTACAGATAGCTTTGGGACAAATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTCTTCTTAAAAGTGGGCAAGCTGCAGCAATCAAGAAGTTAGATGCCAGTAAACAACCTGATGAGGAATTTTTAGCCCAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAACTTCGTTCAGTTGCTTGGTTATTGTATTGATGGAAATTCCCGAGTTCTTGCGTATGAGTTTGCATCTAATGGGTCTCTTCATGATATCTTACATGGTAGAAAAGGCGTTAAAGGAGCACAGCCTGGTCCAGTTTTGTCATGGCCACAAAGAGTAAAAATTGCTGTAGGGGCTGCAAAAGGGCTTGAATACTTGCACGAGAAAGCTAATCCCCACATTATCCATCGGGACATCAAGTCAAGCAATGTTCTAATCTTTGATGATGATGTTGCTAAAATTGCTGATTTTGATTTGTCAAATCAGGCTCCTGATATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGCTATCATGCACCTGAATTATTAGTGTGGTTTTGTGGATGCAGATATGCAATGACTGGACAATTGAATTCTAAGAGTGATGTATACAGCTTTGGTGTTGTCCTTCTGGAACTTTTGACAGGAAGAAAGCCCGTCGATCATACACTGCCACGTGGACAGCAAAGTCTGGTTACCTGGGCTACACCAAAACTTAGCGAGGATAAAGTCAGGCAATGTGTGGATGCAAGACTAGGAGGAGATTACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTATGTGTGCAATATGAAGCTGATTTCAGACCGAACATGAGCATTGTTGTCAAAGCTCTTCAACCTTTGTTGAATGCACGGCCTGGACCTGCTGGTGAAACACCGAATTAA 1113 0.4286 MSCFSCCEEDDLHKAAESGGPYVAKNSAVNDGNYHASEIAKQGAQSAKNQPIEVPAISVEELKEITDSFGTNSLIGEGSYGRVYYGLLKSGQAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCIDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWPQRVKIAVGAAKGLEYLHEKANPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPELLVWFCGCRYAMTGQLNSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0366 370 Pfam Protein tyrosine and serine/threonine kinase 73 354 IPR001245 GO:0004672|GO:0006468
Sto8g0366 370 ProSiteProfiles Protein kinase domain profile. 69 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0366 370 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Sto8g0366 370 SUPERFAMILY Protein kinase-like (PK-like) 49 354 IPR011009 -
Sto8g0366 370 Gene3D Transferase(Phosphotransferase) domain 1 144 362 - -
Sto8g0366 370 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 368 - -
Sto8g0366 370 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Sto8g0366 370 PIRSF ILK 9 361 - -
Sto8g0366 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Sto8g0366 370 SMART serkin_6 69 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0366 370 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0366 Sto-Chr8 2319933 2323207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0366 50 355 Receptor kinase-like Gene Family AT4G02010 48.710 9.88e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sto8g0366 PK_Tyr_Ser-Thr 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0366 K13436 - rcu:8265893 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0366 8 2319933 2323207 Sto13g3741 13 39247468 39250077 CCT
Sto8g0366 8 2319933 2323207 Sto8g0366 8 2319933 2323207 ECH