Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0362 atgaataaggTACTTGTGCCTTCCGTGGCACTGATTTTGGTGGTAGGTTGTGCCGTTGGAGCTATTCTCATGGTAAGACAAAAAGGTGATGATGGTGATAGTGGGTTGAGCTCCCACAATAAGGCAGTGACTGTCATATGCCAAGACTCAGACCAACAAAAAGAGTGCCAAGACACTGTAGGATCCATCAAAGGCGACGATCCAAAAGAATTCATCAAAGTGACGGTAGAAAAGGCGATGGGAGTGGTGATAAAGGCCTTAAACATGAGCGATAAGTTGGCGGTGGAACATAGCAAGGGTGAGGACGAAGGCATAAAGATGGCCGTAGATGATTGCAAAGACTTGATGGAACTCTGCATGCACCAACTAGAAGCCTCCGTTGCTATGATTAAAGACAATGGCATTAAAGACATCGATGCAAGAATCGAAGACCTTCGGAACTGGTTGGCCATGGTGATATCCTTCCAACAATCATGCCACGATGGGTTTGAGACAGACGGTGAGAAGAAGGTGCGTGAGACGCTGCAAGTGGATGGTGGGTTGGACGATGTGCAAAAGATGACTGCAGTTGCGCTTGATGTTGTGGCCAAAATGGACCAACTTCTTTCTGCATTTAACTTGGATTTGATCACCAAACCAGCTACGTCTGATCAACGCATGATGCAAGAAGTGGACCAACATGGCCATCCTAATTGGATGTCTGAATCAGATCGCAAGCTCTTAGCTGAACCAGCGCCTAGACCCAATGCGGTGGTTGCCCAGGATGGTAGTGGCCAATTCAAAACCATTTCTGACGCTCTCAAGTCATACCCTAAGAATCATCAAGGAAGATTCGTTATCTACGTCAAAGCTGGTATTTATAACGAGTACGTTACCGTTGACAAAAAGATGATTAACGTTCTTATGTACGGTGATGGCCCCACAAAAACCATTGTCACCGGAAATAAGCACTTCCCCACCAAAACCATGAATACCGCCACCTTtgCCGCTGTTGGTGACGGATTCATAGCCAAGTTAATGGCATTCGAGAACACGGCTGGTCACGAAGGACATCAAGCAGTGGCACTTCGTGTGCAGTCAGCTCGTGCGGCGTTCTACCAGTGTGCCATGCATGGATACCAAGACACATTGTACGCACAAGGAGGCAAGCATTTGTATCGCGAGTGTGAAATTAGTGGTACGGTGGACTTCATTTTTGGATCGTCTAGGTGTTTGGTCCAGAGATCCAAAATCATTGTGAGGAAGCCAGGCCCTAATCaaaagaacataatagctgCAGATGGCACAACAGCGAAAACTATGGGAACTGGAATTGTGATTCAGAATTGTGATATCGTGTCAGAGCCTGGGCTTGACAAGATTGCTTTTCCGTCTTACTTGGCTAGGCCATGGAAGGAGTTATCAATGGCCATCTTCATGGAAAATAATATTGCTGACTTCATTAACCCAGATGGATGGCTTCCTTGGAATGGCGAGCAAAACCTTAAAACTTGTTATTTCGCTGAGTTTGCCAATACTGGACCTGGTGCTATTGCGGATAGGAGGGTTAAGTGGGGTCGTGGCTTGCTTAATAAGCAATCCGCTGCTCGTTTCACTGCTGAGCACTTACTTATACAAAAATCTGAGCCATGGTTAAGTGAGTGGGGCATCCCTTTTGATCCTAGCTTTACCAGAGCTTAG 1680 0.4571 MNKVLVPSVALILVVGCAVGAILMVRQKGDDGDSGLSSHNKAVTVICQDSDQQKECQDTVGSIKGDDPKEFIKVTVEKAMGVVIKALNMSDKLAVEHSKGEDEGIKMAVDDCKDLMELCMHQLEASVAMIKDNGIKDIDARIEDLRNWLAMVISFQQSCHDGFETDGEKKVRETLQVDGGLDDVQKMTAVALDVVAKMDQLLSAFNLDLITKPATSDQRMMQEVDQHGHPNWMSESDRKLLAEPAPRPNAVVAQDGSGQFKTISDALKSYPKNHQGRFVIYVKAGIYNEYVTVDKKMINVLMYGDGPTKTIVTGNKHFPTKTMNTATFAAVGDGFIAKLMAFENTAGHEGHQAVALRVQSARAAFYQCAMHGYQDTLYAQGGKHLYRECEISGTVDFIFGSSRCLVQRSKIIVRKPGPNQKNIIAADGTTAKTMGTGIVIQNCDIVSEPGLDKIAFPSYLARPWKELSMAIFMENNIADFINPDGWLPWNGEQNLKTCYFAEFANTGPGAIADRRVKWGRGLLNKQSAARFTAEHLLIQKSEPWLSEWGIPFDPSFTRA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0362 559 SMART PMEI_2 38 194 IPR006501 GO:0004857
Sto8g0362 559 Pfam Plant invertase/pectin methylesterase inhibitor 43 193 IPR006501 GO:0004857
Sto8g0362 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 191 IPR006501 GO:0004857
Sto8g0362 559 ProSitePatterns Pectinesterase signature 2. 391 400 IPR033131 -
Sto8g0362 559 Gene3D - 245 556 IPR012334 -
Sto8g0362 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 199 IPR035513 -
Sto8g0362 559 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Sto8g0362 559 PANTHER PECTINESTERASE 6 553 - -
Sto8g0362 559 CDD PMEI-like_3 46 199 - -
Sto8g0362 559 PANTHER PECTINESTERASE 6 553 - -
Sto8g0362 559 Pfam Pectinesterase 249 537 IPR000070 GO:0030599|GO:0042545
Sto8g0362 559 SUPERFAMILY Pectin lyase-like 244 552 IPR011050 -
Sto8g0362 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0362 Sto-Chr8 2296853 2298612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0362 1 551 Carbohydrate Esterase AT2G47030 34.118 3.25e-119 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0362 K01051 - gmx:100820142 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0362 8 2296853 2298612 Sto13g3742 13 39251907 39258342 CCT
Sto13g3743 13 39261519 39262570 Sto8g0362 8 2296853 2298612 CCT