Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0359 ATGGCGACCGGGAATGGCCTGAATGAAGCAAATACATCAAACAATGAAGCAGAATCCAGCGAGAGCGGCCAGCAAAAGGAAAAGGTTGAAACGGTTTCGTTTCACAAGTTGTTCAGCTTTGCCGACTCTACTGATATGATGTTGATGACCTTGGGCACCATTGGAGCTGTTGGAAATGGTTTGGGTTTGCCTCTCATGACGTTGCTATTCGGCGAAATGATTAACGCCTTCGGAAGTAACCAGTATGACCCTAACATCGTCGATCAAATTTCCAAGGTGGCTCTGAAGTTTGTGTACTTGGCGGTGGGATCTGGCATAGCAGCTTTCCTCCAGGTGGCTTGCTGGATGGTCACAGGAGAGAGACAGTCTTCGCGAATAAGGGGTTTGTATTTGAAAACAATACTAAGACAAGATGTGGGCTTCTTTGATAAGGAAACTAGCACAGGAGAGGTAATAGCAAGAATGTCAGGTGACACTGTTCTTATACAAGAAGCCATGGGTGAGAAGGTTGGGAAATTCGTTCAGCTACTGTCAACATTTATTGGCGGTTTTATAATAGCATTTGTGAAAGGGTGGCTTCTTGCCCTTGTCATGTTATCCACTCTTCCTCTTCTTGTGATGGCTGGCGCGTCTGTGGCCATTGTCATAGGAAAGATGGCATCGCAAGGTCAAACCGCCTACGGAAAAGCTGCAAATGTAGTTGAACAGACAATTGGTGCTATTAGAACGGTTGCATCCTTCACAGGAGAAAAGCAAGCTGTATCCAATTACAACAAATTTCTTGCAGATGCACAAAAAGCAGGAGTTCGTGAGGGTTTTGTAGCTGGCATGGGTCTTGGCAGTGTTATGTTTTGTATTTTCTCTGGCTATGCTTTGGCTATATGGTATGGTTCGAAGTTGATACTAGATAAAGGATATAATGGGGGTACAGTGATTAATGTTGTCTTCGCCATCTTAACTTCTTCCATGTCTCTCGGCCAGGCAGCCCCCAGCATGAGTGCTTTTGCTGCAGGTCGAGCTGCAGCTTATAAAATGTTCAAGACTATTGAGAGGATACCAGAGATAGATGCTTATGATCCGAAAGGGAAAACATTAGAGGATATAAATGGCGAAATAGAGTTAAGGGACGTTTATTTCAGCTATCCAGCCAGACCTCAGGAGATGATATTCAATGGGTTCTCTCTTAAAATAGCTAGTGGCACGACTGCAGCTTTGGTTGGacaaagtggaagtggaaagtCTACAGTCATCAGTTTAATAGAAAGATTCTATGATCCTCAAGCAGGTGAAGTTCTGATAGACGGCATTAACCTGAGAGAATTTCAACTTAGATGGATCAGAGGAAAAATTGGGCTTGTCAGTCAGGAGCCTGTGCTTTTTACATCTAGCATTAAGGATAACATTGCTTATGGAAAGGAAGGAGCAACAACTGAAGAGATAAGAGCTGCTGCTGAACTTGCAAATGCTGCTAAATTCATCGATAAACTACCCCAGGGATTGGACACAATGGTTGGTGAGCATGGAACTCAGATGTCCGGTGGACAAAAGCAGCGTATTGCCATTGCAAGAGCAATTTTGAAAAATCCAAGGATTTTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTAGACAGAATCATGGTCAACCGAACTACTGTTATTGTTGCGCATCGCTTGAGCACAGTGAGAAATGCTGACACGATTGCTGTGATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACTCAGAACTACTCAAGGATCCTGAGGGAGCATACTCTCAACTTATACGCTTGCAAGAAGTAAACAGAGAGTCAGAAGACACTGAAGATCATGCAAACAAAAGTGATCATACCTCATTCTCAAGGCATTCTAGTCAAAAAAGGTCTCTAGGAAGATCCATAAGCCGAGGATCTTCTATAGGAAACAGCAGCCGCCACTCATTTTCAGTTTCATTTGGCTTGCCCACGGGTGTTAGTGTTGTTGATCCTGAAGCCGAAACATCAGAGCCAAAAGAAAAACCACCTGCGGTTCCCCTCCGCCGCCTTGCTTACCTCAACAAGCCAGAAATTCCAGTGCTTCTGATTGGATCTGTGGCTGCCATTGTACATGGTGTACTCTTTCCATTATTTGGTATTCTACTTTCCAGTGCAATCAAAACGTTCTATGAGCCACCCCATGAGATGAAGAAGGATGCCAAGTTCTGGTCAATAATGTTTGCGGTACTTGGGGTTGCGGCTGCGGTGGCAATTCCAGCAAAAGGATACTTTTTCGCTAGGGCCGGTACTAAGTTGATCCAGCGCATTAGGCTTATGTGTTTTGAGAAGGTAGTGAACATGGAGGTAGGTTGGTTTGATGATTCCGAGCATTCAAGTGGTGTAATTGGAGCAAGGCTTTCAGCAGATGCTGCAAGTGTGCGTGCCCTCGTTGGGGATGCTCTCGGACAATTGGTTGAGAATCTAGCTTCAGTATTGGCGGGTTTGATCATTGCTTACATTGCTAGCTGGCAGTTGGCGTGTATTATTCTTATATTGATCCCCTTGATTGGAGTTAACGGATATGTTCAAATGAAATTCATGAAGGGGTTTAGTGCAGATGCTAGGACGATGTACGAGGAAGCAAGTCAAGTTGCTAATGATGCGGTCGGAAGCATAAGAACAGTAGCCTCATTCTGTGCTGAAGAGAAGGTGATGGAACTATACAGGAAGAAATGTGAAGGCCCTACGCAAGCAGGGGTACGACAAGGCTTAATCAGTGGGACAGGATTTGGAGTGTCGTTCTTCCTACTATTTAGTGTCTACGCGACCAGTTTCTACGCGGGAGCAAGACTTGTGGACTCTGGCAAAGCTACATTCGGAGACGTTTTTCGGGTTTTCTTTGCTTTAACCATGGCATCTTTTGCTGTTTCCCAATCAAGCTCCTTGGCTCCTGATTCTGGCAAGGCCAGGGTAGCTGCTGCTTCCATATTTGGAATCATTGACAGGAAATCGATGATAGATCCAAGTGATGATTCAGGTACCACATTGGATGAAGTAAAGGGAGAAATTGAACTTCGTCATGTAAGCTTCAAGTATCCATGTAGGCCAGATATACAGATTTTCCGAGACCTTAATTTGGCTATCCATTCTGGCAAGACGGTGGCccttgttggtgaaagtggaaGTGGGAAATCCACAGTGATTGCGTTACTAGAAAGATTTTATGATCCCGATTCAGGTATAATTACACTTGATGGAGTAGAGATTCAGAGGTTAAAGCTCAAGTGGTTAAGGCAGCAGATGGGTCTTGTGAGCCAAGAACCAGTATTGTTCAATGACACCATTCGTGCCAATATTGCCTATGGAAAAGAAGGCAATGCAACTGAAGCAGAGATCATAGCTGCAACCGAACTGGCCAATGCACATAAGTTCATTAGTGGCTTACAACagGGTTATGATACAGTTGTGGGAGAGAGGGGAATCCAATTATCTGGTGGGCAGAAGCAAAGGGTAGCCATTGCTCGTGCTATAATTAAGAGTCCAAAGATCATGCTACTGGATGAGGCCACAAGTGCATTAGATGCCGAGTCAGAGAGGGTGGTTCAAGATGCATTGGATAGAGTGATGGTGAACAGAACCACAGTGGTTGTGGCTCATCGTCTATCTACAATAAAGAATGCAGATGTCATTGCCGTGGTTAAAAATGGAGTTATAGTTGAGAAAGGAAGGCATGAGACTTTGATTAACATCAAGGATGGGTTTTATGCTTCTTTAGTCCAACTTCATACAAGTGCTTCCACagcttga 3816 0.4379 MATGNGLNEANTSNNEAESSESGQQKEKVETVSFHKLFSFADSTDMMLMTLGTIGAVGNGLGLPLMTLLFGEMINAFGSNQYDPNIVDQISKVALKFVYLAVGSGIAAFLQVACWMVTGERQSSRIRGLYLKTILRQDVGFFDKETSTGEVIARMSGDTVLIQEAMGEKVGKFVQLLSTFIGGFIIAFVKGWLLALVMLSTLPLLVMAGASVAIVIGKMASQGQTAYGKAANVVEQTIGAIRTVASFTGEKQAVSNYNKFLADAQKAGVREGFVAGMGLGSVMFCIFSGYALAIWYGSKLILDKGYNGGTVINVVFAILTSSMSLGQAAPSMSAFAAGRAAAYKMFKTIERIPEIDAYDPKGKTLEDINGEIELRDVYFSYPARPQEMIFNGFSLKIASGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLREFQLRWIRGKIGLVSQEPVLFTSSIKDNIAYGKEGATTEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQMSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADTIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNRESEDTEDHANKSDHTSFSRHSSQKRSLGRSISRGSSIGNSSRHSFSVSFGLPTGVSVVDPEAETSEPKEKPPAVPLRRLAYLNKPEIPVLLIGSVAAIVHGVLFPLFGILLSSAIKTFYEPPHEMKKDAKFWSIMFAVLGVAAAVAIPAKGYFFARAGTKLIQRIRLMCFEKVVNMEVGWFDDSEHSSGVIGARLSADAASVRALVGDALGQLVENLASVLAGLIIAYIASWQLACIILILIPLIGVNGYVQMKFMKGFSADARTMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPTQAGVRQGLISGTGFGVSFFLLFSVYATSFYAGARLVDSGKATFGDVFRVFFALTMASFAVSQSSSLAPDSGKARVAAASIFGIIDRKSMIDPSDDSGTTLDEVKGEIELRHVSFKYPCRPDIQIFRDLNLAIHSGKTVALVGESGSGKSTVIALLERFYDPDSGIITLDGVEIQRLKLKWLRQQMGLVSQEPVLFNDTIRANIAYGKEGNATEAEIIAATELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKIMLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHTSASTA 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0359 1271 MobiDBLite consensus disorder prediction 635 656 - -
Sto8g0359 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 608 IPR003439 GO:0005524
Sto8g0359 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1016 1264 IPR027417 -
Sto8g0359 1271 CDD ABC_6TM_Pgp_ABCB1_D2_like 694 1009 - -
Sto8g0359 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 610 IPR027417 -
Sto8g0359 1271 MobiDBLite consensus disorder prediction 613 634 - -
Sto8g0359 1271 Gene3D - 1016 1270 IPR027417 -
Sto8g0359 1271 Pfam ABC transporter transmembrane region 704 976 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0359 1271 Pfam ABC transporter transmembrane region 49 323 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0359 1271 MobiDBLite consensus disorder prediction 1 26 - -
Sto8g0359 1271 ProSitePatterns ABC transporters family signature. 1166 1180 IPR017871 GO:0005524
Sto8g0359 1271 Gene3D ABC transporter type 1, transmembrane domain 95 936 IPR036640 GO:0005524|GO:0016021
Sto8g0359 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1026 1263 IPR003439 GO:0005524
Sto8g0359 1271 CDD ABC_6TM_Pgp_ABCB1_D1_like 49 333 - -
Sto8g0359 1271 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g0359 1271 SMART AAA_5 1053 1246 IPR003593 -
Sto8g0359 1271 SMART AAA_5 399 585 IPR003593 -
Sto8g0359 1271 SUPERFAMILY ABC transporter transmembrane region 35 356 IPR036640 GO:0005524|GO:0016021
Sto8g0359 1271 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 8 1267 - -
Sto8g0359 1271 Pfam ABC transporter 1045 1194 IPR003439 GO:0005524
Sto8g0359 1271 Pfam ABC transporter 391 539 IPR003439 GO:0005524
Sto8g0359 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 705 991 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0359 1271 Gene3D - 370 623 IPR027417 -
Sto8g0359 1271 CDD ABC_MTABC3_MDL1_MDL2 1026 1264 - -
Sto8g0359 1271 ProSitePatterns ABC transporters family signature. 511 525 IPR017871 GO:0005524
Sto8g0359 1271 MobiDBLite consensus disorder prediction 613 656 - -
Sto8g0359 1271 SUPERFAMILY ABC transporter transmembrane region 684 1010 IPR036640 GO:0005524|GO:0016021
Sto8g0359 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 337 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0359 1271 CDD ABC_MTABC3_MDL1_MDL2 372 610 - -
Sto8g0359 1271 PANTHER - 8 1267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0359 Sto-Chr8 2269791 2274834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0359 25 1265 Calmodulin-binding Proteins AT2G36910 45.694 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0359 K05658 - gmx:100800034 1993.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0359 8 2269791 2274834 Sto13g3746 13 39280916 39286735 CCT