Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0351 ATGGGCAAAGGGTCAAGCTCTTCTTCATCCTCTATCAGCAGCAGCAACCACCCACTTCTTTCAACTGCATCATCTCTCACCCACTTCAACCCTCACCTTCCTACAGATCTTAGGCTTGGTTTGAGCATTTCAGCCACTCAACATGTACCCTCTTCATCTATCTCAAgtagggggCAGCCTTCGGATTGGACAGCAATCCAGCGTTGTGAAGCAACAGAAGTAAATGAGTATGGCGATCATAGCAGCTTGTTTGTGAAGGTGTACATGGAAGGCATCCCAATTGGAAGAAAATTGAATCTGGTGGCTCATGCTGGCTACCATGACTTAGTCAAGACTCTTGAACGCATGTTTGACACTACCATTCTCtGGGGTACTGGAATGGACGGAGTGCAACCAGAGAGATGCCATGTGCTAACCTATGAAGACGAAGAAGGGGACTTGATCATGGTTGGAGATGTTCCTTGGGAGATGTTCCTGTCCACTGTCAAGAGATTGAAGATAACGAGGGTAGATGCATTTGGGTGCTAA 528 0.4602 MGKGSSSSSSSISSSNHPLLSTASSLTHFNPHLPTDLRLGLSISATQHVPSSSISSRGQPSDWTAIQRCEATEVNEYGDHSSLFVKVYMEGIPIGRKLNLVAHAGYHDLVKTLERMFDTTILWGTGMDGVQPERCHVLTYEDEEGDLIMVGDVPWEMFLSTVKRLKITRVDAFGC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0351 175 Pfam AUX/IAA family 75 169 IPR033389 -
Sto8g0351 175 Gene3D - 77 174 - -
Sto8g0351 175 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 174 IPR003311 GO:0005634|GO:0006355
Sto8g0351 175 ProSiteProfiles PB1 domain profile. 82 172 IPR000270 GO:0005515
Sto8g0351 175 SUPERFAMILY CAD & PB1 domains 79 167 - -
Sto8g0351 175 PANTHER AUXIN-INDUCED PROTEIN 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0351 Sto-Chr8 2210938 2211766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0351 86 167 B3 DNA Binding Superfamily AT4G23980 39.024 4.07e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sto8g0351 AUX_IAA 5.7e-29 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0351 K14484 - gmx:100781660 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0351 8 2210938 2211766 Sto13g3753 13 39327916 39328780 CCT