Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0318 ATGGGAACAATTCCATCAGAACCGTCGAAAGATGAGATGACCCACAGTGAAGGACTGGGAGCCTCTAATGAGGATAGTCCCGTGAAGGGAGAGGAGGCCCAGTTGAGGAAAGTGaAGCAAAAAGCATCCAATAAAGGTGGGGTGAAGTCAAGTCAGGTGCACATGGGAAGACACTCTTGCTGTTACAAGCAGAAACTAAGGAAAGGCCTCTGGTCTCCTGAGGAAGACGAGAAGCTTCTCAATTACATCACCAAGCATGGCCATGGATGTTGGAGCTCTGTCCCCAAACTTGCTGGTTTGCAGAGATGTGGAAAGAGCTGCAGGTTGAGGTGGATAAATTACCTTAGGCCTGATTTGAAAAGAGGAGCATTCTCACAGCAGGAAGAGAATTTGATAATTGAACTCCATGCAGTTCTGGGCAACAGGTGGTCACAGATAGCAGCTCAGTTACCGGGAAGAACTGACAATGAGATAAAGAATCTATGGAATTCCTGCCTCAAGAAGAAGCTGAGGCAAAGAGGCATTGACCCCAACACACACAAACCACTCTCAGAGGTGGAGAACGATAAGGACAAGGGAGGTGCAACCGACAAGGGCAATCAGAAAGGGTCAGTGAGATCCAATGAATTGAGTGTGGGTGTTGGTTCCAGTTCTTCTCAGGTTATGTCAGAGCTTAATTCCAGTATCACTCCCGCTGCTATGCTCAATTCTGTGTCAAGTTCAATCTTCCCAACTCCAACACATGTCAATGTAAATGTAAATACCCAGTCTAATAATAATCCTTCCATATCCTCTGGGGATATTGATGGGGTTCAGAACTGGGAAGCCAGTACCTTCAGTAACAACGGAAGCAAGAGCAATGGAAGTAGTGGAAGTATCCAATTACAAAGCAGCAATAACTTCCTAGAGAACAACACTTTAGCATGGGGATTGGCGGAGTCTGTGAAGGCTGTCAATAAAGATGCTCAGGTTCCCTTGCAAGCAGAACAAGAAGACATTAAATGGTCTGAGTATCTAAACACTCCATTCTTTCTGGGAAACACAGTTCAGAATCCAACCTCTCAATCTATCTACAGTGAGGTTAAACCAGAAACAGGCTTCATAACAGATGAATCAAGTACTAGTTGGCACCATAGCCAGCACCAACCTGTTTTTCAAGCTTCAGATATCTACACCAAGGATCTGCAGAGATTCTCAGTGGCTTTTGGACAAACCCTTTAG 1221 0.4521 MGTIPSEPSKDEMTHSEGLGASNEDSPVKGEEAQLRKVKQKASNKGGVKSSQVHMGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENDKDKGGATDKGNQKGSVRSNELSVGVGSSSSQVMSELNSSITPAAMLNSVSSSIFPTPTHVNVNVNTQSNNNPSISSGDIDGVQNWEASTFSNNGSKSNGSSGSIQLQSSNNFLENNTLAWGLAESVKAVNKDAQVPLQAEQEDIKWSEYLNTPFFLGNTVQNPTSQSIYSEVKPETGFITDESSTSWHHSQHQPVFQASDIYTKDLQRFSVAFGQTL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0318 406 ProSiteProfiles Myb-like domain profile. 116 166 IPR001005 -
Sto8g0318 406 MobiDBLite consensus disorder prediction 1 52 - -
Sto8g0318 406 MobiDBLite consensus disorder prediction 173 197 - -
Sto8g0318 406 Gene3D - 122 196 - -
Sto8g0318 406 Pfam Myb-like DNA-binding domain 121 165 IPR001005 -
Sto8g0318 406 Pfam Myb-like DNA-binding domain 68 115 IPR001005 -
Sto8g0318 406 MobiDBLite consensus disorder prediction 173 217 - -
Sto8g0318 406 CDD SANT 123 163 IPR001005 -
Sto8g0318 406 PANTHER HOMEODOMAIN-RELATED 209 399 - -
Sto8g0318 406 PANTHER HOMEODOMAIN-RELATED 55 211 - -
Sto8g0318 406 MobiDBLite consensus disorder prediction 200 217 - -
Sto8g0318 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 170 IPR017930 -
Sto8g0318 406 Gene3D - 65 121 - -
Sto8g0318 406 PANTHER MYB DOMAIN PROTEIN 55 55 211 - -
Sto8g0318 406 PANTHER MYB DOMAIN PROTEIN 55 209 399 - -
Sto8g0318 406 SMART sant 67 117 IPR001005 -
Sto8g0318 406 SMART sant 120 168 IPR001005 -
Sto8g0318 406 SUPERFAMILY Homeodomain-like 66 162 IPR009057 -
Sto8g0318 406 MobiDBLite consensus disorder prediction 252 293 - -
Sto8g0318 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 119 IPR017930 -
Sto8g0318 406 ProSiteProfiles Myb-like domain profile. 63 115 IPR001005 -
Sto8g0318 406 CDD SANT 71 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0318 Sto-Chr8 2030942 2032984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0318 55 406 MYB Transcription Factor Family AT1G09540 51.036 5.33e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g0318 Myb_DNA-binding 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0318 K09422 - gmx:100788976 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0318 8 2030942 2032984 Sto13g3787 13 39506647 39507819 CCT
Sto13g3787 13 39506647 39507819 Sto8g0318 8 2030942 2032984 ECH
Sto8g0318 8 2030942 2032984 Sto13g3787 13 39506647 39507819 ECH
Sto8g0318 8 2030942 2032984 Sto8g0318 8 2030942 2032984 ECH