Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0299 ATGGGCGGAGGTGGAGCGACGCCGTACGCAGAGGCGCAGTACTCATCGGCCAAGATTTCAGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAAGGCTGCGATCCGCACGCCATCGCGCAGAACATTAGCTCGGCGCTGGTTCAGACGAACTATTGTGGGCCTGTTTCCATCTCCGCCTATGGTGATACTACTCGCATCCCGGCCTCTGTACAGCATGCTCTTTCCAGTACCGGAATATCCCTCAATCATGTCCCAGCTGGCGTTAAAGACGCTAGCGACAAAAAAATTCTTGTCGACATGCTGTTCTGGGCTGTGGATAATCCTGCACCtgctaattatttattaatttctggTGACCGAGACTTCTCTAATGCTCTTCATCAATTGAGGATGAGGAGATATAATATTCTTCTTGCACAACCTCAGAAGGCATCTGCACCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTCTTAGCTGGAGGACCTCCTTTAACTAATGGCGAATCACAACAACTTGGTAATAATAACCATCTAACAAGTTCTGACACCTTACAAATTCCAGTCTCCAGTGCCGGGCAGTCAAAGCAGCACAGGGATTCCTTTTCTGAAGTTCATTCAGGAAATTACAATTTTCCAAATTCTGGAAGGGGATTAGATTCTAGATACCAGGGAAAACCTACATGGAGAAACCCTAGTCAACCAAATGGACCCAGGCCTTTGAACCCACCAATTGGACTTCAAGAAAATCATAGCAATGTAAATTCTTATCGTCAAGCAAACTGCAGCTCAAATTTTCCCCCGAGTGGATCTGCTCCAAATTTTGTGCATGGCAATCCTGACCAGTTATGGAGCAATAACGGCAATCTACTGGGCAATAGCCAGATTCCTTATTCACAGCCATTAAGACCCAACGGTTACCCACTGCAACCTGCTTTTGCGCCGAGAAATCCGTATCCAACTAATTCTCATTCTTTTGCTACTTCACCTGTGCCTCCTAGGACTAGTGGGCCAAGCTTCACCTCGGGACCACTCACAAATGTGCCAGATATAGGTAATCTGAACATTTCTGGATATTCCAACAGTATTCGTGATCCGCATAATTTTCAGCAACGGAGTGGAGAGCTGAAACAAAATCCTGACAATAAAATTCCAAATCCTGCAAGGTCACTAGACGAACAAAATGGACATATGGTACAAAGCACACAACAATTATACCAAGTTCACTCTCACGGTCCAGAATATCCGCCTACATCAATTGCAGCAATGGGTAATAAAAATCATCCTGGTAATGGTTTGTGGGGAACTCCAGGATGCCCTAAACCTTCTGAATATGTACAAGGGCTTATAGGGGTTGTTTTACTCGCCTTGAATACTCTTAAAAATGAAAAGATAATGCCAACTGAGTCAAATATATCTGATTGCATCCGTTATGGAGATCCCAAACACCGAAACACTGATGTTAAGAAGGCTTTGGAGAGTGCAATTGAACAGCAAATGGTGGTGAAACAGAATGTAGGCGCTTTACAGTTGTATATTGGTAAGAATGATAAACTTTGGAAGTGTGTAAACCCTATAGGTGGTAATCCTAATCAGCACTCAAAAGAAACATGGGATGAAATGCAGAAATTTTTAACTACTGCTTCTGGAAGATCAGCGATAATGGATACTCAAAGCAAATATGAAGCAGGTACTGTGATAAAGAATATGTGCTTTAAAGATTTTGCTTTGGGAGATGTCCTTCAGATTTTGAACATGGTGTTAGCTCATAAAAAGTGGATTGTGCCTCGGCAGTCAGGATGGCAACCACTTaacattactctgcctcaggtgAACTCTGATGTAGGAGTCACAACTGAAATACCGGAAGCCAAAGTTGGTAGTGGTAATGGGAAGATGCCTGAAGAAAACTAA 1926 0.4299 MGGGGATPYAEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQTNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNNNHLTSSDTLQIPVSSAGQSKQHRDSFSEVHSGNYNFPNSGRGLDSRYQGKPTWRNPSQPNGPRPLNPPIGLQENHSNVNSYRQANCSSNFPPSGSAPNFVHGNPDQLWSNNGNLLGNSQIPYSQPLRPNGYPLQPAFAPRNPYPTNSHSFATSPVPPRTSGPSFTSGPLTNVPDIGNLNISGYSNSIRDPHNFQQRSGELKQNPDNKIPNPARSLDEQNGHMVQSTQQLYQVHSHGPEYPPTSIAAMGNKNHPGNGLWGTPGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTESNISDCIRYGDPKHRNTDVKKALESAIEQQMVVKQNVGALQLYIGKNDKLWKCVNPIGGNPNQHSKETWDEMQKFLTTASGRSAIMDTQSKYEAGTVIKNMCFKDFALGDVLQILNMVLAHKKWIVPRQSGWQPLNITLPQVNSDVGVTTEIPEAKVGSGNGKMPEEN 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0299 641 CDD PIN_limkain_b1_N_like 18 142 - -
Sto8g0299 641 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 610 - -
Sto8g0299 641 MobiDBLite consensus disorder prediction 250 305 - -
Sto8g0299 641 MobiDBLite consensus disorder prediction 320 391 - -
Sto8g0299 641 Gene3D - 10 161 - -
Sto8g0299 641 MobiDBLite consensus disorder prediction 194 391 - -
Sto8g0299 641 PANTHER LIMKAIN B LKAP 2 610 IPR024768 GO:0005777|GO:0010468|GO:1903231
Sto8g0299 641 Pfam NYN domain 18 154 IPR021139 GO:0004540
Sto8g0299 641 MobiDBLite consensus disorder prediction 194 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0299 Sto-Chr8 1940401 1943179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0299 10 201 C2H2 Transcription Factor Family AT5G61190 70.619 2.90e-84 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0299 - - gmx:100794608 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3799 13 39563567 39565970 Sto8g0299 8 1940401 1943179 ECH
Sto8g0299 8 1940401 1943179 Sto8g0299 8 1940401 1943179 ECH