Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0293 ATGGGTGCGGATCTTAATGCTGAATTATCTAAGAAAACTCTCATTTTTGGTCTTAAGGTTTGGCAAATAATTGGAATTGCGGTTGCATTGTTTATAGTAGTTATCCTCTTCCTCTCTGTTTGTCTTACTTCACGGAAGAAATCAAGAAAAACCAAGAATAAGATTCCTCTTAGTCAAATACCGACTGTTTCAAAGGAAATCAAGGAAGTGAGGGTTGAGCAAGTATCAGCAAATGAATTTGTTCCTCGTGATGGAATACTTCTCACAATTCATGATAAATCCAGTGACAAAGAATCAGACAAAGTTATGGTTCATCTGGGTTTGGGGAAGATGAAGAATGGGGATAATTGCAGTTATTCGGATTCATTTAATCACTTAGAGAAAGATGGAGGCGGGTCACAGTCAGGAGAAGAAGGAAGCTCTGGCACCGTCACAGTGTATAGGCATTCTTCTTCACACCCTATAACAGCTCCTTCCCCTCTCACTGGCCTTCCGGAGTTCTCTCACTTGGGTTGGGGCCACTGGTTTACGTTGAGGGACCTTGAACTTGCTACAAATCGATTTTCGAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTTTATAGGGGACAGTTGATTAATGGGAGTCCTGTGGCAGTTAAAAAGATACTCAATAACGTTggtcaagcagagaaagaatTTAGAGTGGAAGTTGAAGCTATTGGTCATGTCCGCCATAAAAATTTGGTTCGCCTCTTGGGGTACTGCATTGAGGGGACACACAGGATGTTAGTGTATGAGTATGTCAATAATGGAAATTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGGTACCTTACATGGGAAGCGCGTATGAAGATTCTTCTTGGCACGGCTAAAGCAGTTTTGACTAGCATGTACTATAAAACTGCAATGCTTTCTCAGGTTAATCTGGTTGATTGGCTGAAGATGATGGTTGGAAGTAGGCGATCAGAAGAAGTGGTGGACCCAAATATCGAGGCAAGGCCATCAACCAGAGCTTTAAAACGGGCCCTCTTGACCGCTTTGAGATGTGTAGATCCAGATTCCGAGAAAAGACCCAAGATGGGCCAAGTTGTGCGGATGCTTGAGTCACATGAATACCCTTTACCTAGAGAGGACCGAAGGCACAGAAGAAATCAAGGGAGTAGCGTGGAAATTGAATCCCAGAAGGAATATTCAGACACAGATAGATCAGAGAGCAGAGGGTAA 1242 0.4259 MGADLNAELSKKTLIFGLKVWQIIGIAVALFIVVILFLSVCLTSRKKSRKTKNKIPLSQIPTVSKEIKEVRVEQVSANEFVPRDGILLTIHDKSSDKESDKVMVHLGLGKMKNGDNCSYSDSFNHLEKDGGGSQSGEEGSSGTVTVYRHSSSHPITAPSPLTGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGSPVAVKKILNNVGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKAVLTSMYYKTAMLSQVNLVDWLKMMVGSRRSEEVVDPNIEARPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPLPREDRRHRRNQGSSVEIESQKEYSDTDRSESRG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0293 413 MobiDBLite consensus disorder prediction 359 413 - -
Sto8g0293 413 SUPERFAMILY Protein kinase-like (PK-like) 172 299 IPR011009 -
Sto8g0293 413 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Sto8g0293 413 Pfam Protein tyrosine and serine/threonine kinase 190 298 IPR001245 GO:0004672|GO:0006468
Sto8g0293 413 MobiDBLite consensus disorder prediction 122 146 - -
Sto8g0293 413 Gene3D Transferase(Phosphotransferase) domain 1 300 395 - -
Sto8g0293 413 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 311 411 - -
Sto8g0293 413 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 299 - -
Sto8g0293 413 ProSiteProfiles Protein kinase domain profile. 188 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0293 413 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Sto8g0293 413 PANTHER OS01G0323000 PROTEIN 3 299 - -
Sto8g0293 413 PANTHER OS01G0323000 PROTEIN 311 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0293 Sto-Chr8 1908657 1911603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0293 23 299 Trihelix Transcription Factor Family AT1G23540 32.374 8.47e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto8g0293 PK_Tyr_Ser-Thr 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0293 - - cpap:110815431 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0293 8 1908657 1911603 Sto5g1714 5 12260226 12276921 CCT
Sto8g0293 8 1908657 1911603 Sto8g0293 8 1908657 1911603 ECH