Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0259 ATGGCGTCTTTCGAACCAAACTTAGATTCCACTCATCCCGATACGTCGTTCCAAGAATCCAATCACAAAAAGCGCAGGAAAATCGCGCACCATCAGAATTCGCTCAACCAGATTCCATGGAGATCCCACACAGACCAGCAGATCTACTCCTCCAAGCTCGTCGAAGCCCTCCGCTATGTCCTCCGTCGGACTCCTCCTTCTCCCACGGCCAAACCTACCAGAGGTCGCGAAATCCGCCAGACCGCCGACAGAATTCTAGCCGCCACGGCCAAGGGAAGAACTCGGTGGAGTCGAGCGATTCTGGCGACTCCACTCAGCCGTTGGAAATTCCAGAGGCAACACAAGAAGGTGAAGAAGGTGTCCAAAGGATTGAAGAAACCGGAGATTAGGAAAGAGAGAAGGAGGTTACCGGCTGTGCAGAAGAAAGCGCGCCTTCTCAGCCGCTTAGTTCCCGGTTGCCAGAAGGTTTCCTTCCCCAATCTTCTCGAAGAAACTACTGATTATATATCCGCCTTGGAGATGCAAGTTCGCGCCATGACCGCACTCACCGACCTACTCACCGGTGGTGGCGCGCCGGCCGATCGGCTCCAGTTGGCTCGACCGTGA 606 0.5479 MASFEPNLDSTHPDTSFQESNHKKRRKIAHHQNSLNQIPWRSHTDQQIYSSKLVEALRYVLRRTPPSPTAKPTRGREIRQTADRILAATAKGRTRWSRAILATPLSRWKFQRQHKKVKKVSKGLKKPEIRKERRRLPAVQKKARLLSRLVPGCQKVSFPNLLEETTDYISALEMQVRAMTALTDLLTGGGAPADRLQLARP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0259 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 18 195 IPR044660 GO:0006355
Sto8g0259 201 PANTHER TRANSCRIPTION FACTOR BHLH149 18 195 - -
Sto8g0259 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Sto8g0259 201 MobiDBLite consensus disorder prediction 1 15 - -
Sto8g0259 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 188 IPR036638 GO:0046983
Sto8g0259 201 MobiDBLite consensus disorder prediction 1 39 - -
Sto8g0259 201 CDD bHLH_AtIBH1_like 130 183 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0259 Sto-Chr8 1737056 1737661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0259 40 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 54.054 5.52e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0259 - - aprc:113873135 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0259 8 1737056 1737661 Sto13g3817 13 39656435 39657043 CCT
Sto13g3817 13 39656435 39657043 Sto8g0259 8 1737056 1737661 ECH
Sto8g0259 8 1737056 1737661 Sto8g0259 8 1737056 1737661 ECH