Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0252 ATGCCATCATTCATAAGTTGTGGTCATAGTGTGGACATGGAGGAGGAATTGTTGATTGAAAAAGTGTGCGACCTCTATCATAAAATCTCTAGCTTAGAGAGTCTCAAGCCTTGCCACAATGTGGACACCCTTTTCACCCAGCTAGTCCTCACATGCATACCCCCCAACCCCATTGATGTCTCCAACCTCCCCCAACCCCTCCAAGACATGAGATCCAAACTCATAAGGCTCTGTGGCCAAGCCGAATCCCTTCTCGAAACCCACTATTCCAACATCCTAGCCTCCTACCAAAACCCCCTTCACCACCTCCACATCTTCCCCTATTACTCCAACTACATCAACCTCGCTCTCCTCGACTTCACTATCCTCACCCAGCACTCCACCCATCTCCCATCCACCATAGCCTTCGTgggttccggcccccttccctTCACTTCTATTGTCTTAGCCTCCAACCACCTCCCCACCACCACCTTCCACAACTATGACGTCGACCCACTCGCTAATTCCATGGCCCGTCGCTTGTTTTGCGCCCACCCTGACTTGTCCAACCGGATGCTCTTCCACACCACCGATATTATGGATGTGACGACGGAGTTGAAGGAGTATGAGGTGGTGTATTTGGCGGCGCTTGTGGGGATGGACAAGGAGGAGAAGACTCGGATAATTGAGCATTTGGGAAAGTATATGGCTCCCGGTGCCTTTTTGATGCTGAGGAGTGCGCATGGGGCTCGGGCCTTTCTCTACCCCGTGGTTCACCCTTCTGATCTCCAGGGGTTTGAGCTGCTCACTGTGTTTCATCCAACCGATGAGCAACAGCAACCACCTCCTCTTCCTAACAATAAGATATTGAGTACCAAGTGTTCTGATCAGATCCAACTCTTCAATCCCCTCATCAATCACGAGGAATTCGCCATTGAGGAGCAATCATCCTAA 936 0.4947 MPSFISCGHSVDMEEELLIEKVCDLYHKISSLESLKPCHNVDTLFTQLVLTCIPPNPIDVSNLPQPLQDMRSKLIRLCGQAESLLETHYSNILASYQNPLHHLHIFPYYSNYINLALLDFTILTQHSTHLPSTIAFVGSGPLPFTSIVLASNHLPTTTFHNYDVDPLANSMARRLFCAHPDLSNRMLFHTTDIMDVTTELKEYEVVYLAALVGMDKEEKTRIIEHLGKYMAPGAFLMLRSAHGARAFLYPVVHPSDLQGFELLTVFHPTDEQQQPPPLPNNKILSTKCSDQIQLFNPLINHEEFAIEEQSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0252 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 292 IPR004298 GO:0030410|GO:0030418
Sto8g0252 311 Pfam Nicotianamine synthase protein 15 271 IPR004298 GO:0030410|GO:0030418
Sto8g0252 311 PANTHER NICOTIANAMINE SYNTHASE 4-RELATED 14 271 - -
Sto8g0252 311 Gene3D Vaccinia Virus protein VP39 16 274 IPR029063 -
Sto8g0252 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 87 242 IPR029063 -
Sto8g0252 311 PANTHER NICOTIANAMINE SYNTHASE 3 14 271 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0252 Sto-Chr8 1692521 1693540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0252 14 271 Nicotianamine Synthase Gene Family AT1G56430 62.069 2.87e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0252 K05953 - gmx:100794250 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0252 8 1692521 1693540 Sto8g0252 8 1692521 1693540 ECH