Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0238 ATGGATCTTAACCAAAAGGAATTCACTGATAACAACAAGTGCTGTTCTGattgcaaaacaactaagaCCCCACTTTGGAGAGGAGGACCTGCTGGCCCCAAGAGCCTGTGCAACGCATGCGGGATAAGATACAGGAAGAGAAGGGTTTCAACGGTGGGATTGAAGCTAAAGAAAGGACaagagaggaagaaagagagaagacaTAGACAAAGTGGTGGTGGCGGCGGAGGAAAGGATTTGAAGGAGTTTTTGAAGATGAAGTTGATGGCATTGGGGGAGGAGGTTCTGTTGCAACAGTCACAGTCGGTGGTGAAGAAGCAGAAGAGGAGGAAGTTAGGAGAAGTGGAAGAAGCAGCCGTTTGCTTGATGGCCTTGTCCTGTGGCTTTGTTTTCGCTTAA 399 0.4361 MDLNQKEFTDNNKCCSDCKTTKTPLWRGGPAGPKSLCNACGIRYRKRRVSTVGLKLKKGQERKKERRHRQSGGGGGGKDLKEFLKMKLMALGEEVLLQQSQSVVKKQKRRKLGEVEEAAVCLMALSCGFVFA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0238 132 MobiDBLite consensus disorder prediction 55 79 - -
Sto8g0238 132 ProSiteProfiles GATA-type zinc finger domain profile. 9 45 IPR000679 GO:0006355|GO:0043565
Sto8g0238 132 CDD ZnF_GATA 15 68 IPR000679 GO:0006355|GO:0043565
Sto8g0238 132 PANTHER GATA TRANSCRIPTION FACTOR 16 4 132 - -
Sto8g0238 132 Gene3D - 10 72 IPR013088 GO:0006355|GO:0008270
Sto8g0238 132 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 11 51 - -
Sto8g0238 132 SMART GATA_3 9 61 IPR000679 GO:0006355|GO:0043565
Sto8g0238 132 Pfam GATA zinc finger 15 49 IPR000679 GO:0006355|GO:0043565
Sto8g0238 132 PANTHER OS01G0976800 PROTEIN 4 132 - -
Sto8g0238 132 ProSitePatterns GATA-type zinc finger domain. 15 40 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0238 Sto-Chr8 1606381 1607354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0238 1 132 C2C2-Gata Transcription Factor Family AT5G49300 50.000 7.06e-33 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto8g0238 GATA 4.1e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0238 - - lang:109330084 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0850 3 5900543 5901185 Sto8g0238 8 1606381 1607354 ECH
Sto8g0238 8 1606381 1607354 Sto8g0238 8 1606381 1607354 ECH