Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0227 ATGTCAGCGGAGCCGCTGATTGAACGGTCCGATGCAATGTCGGAAACTTTGTCCACTTCGCTGTCATTCCGCCAAAGCGCCGAACCTCATTGGATATTTGAAGAATTGCCAATGGCCACCATCGTTCACGTTTCCCGACCAGACACCGGCGATATTAGCCCAATCCTTCTCTCTTACACCATTGAATTGCAGTACAAACAGTTCAAGTGGCGCTTACTGAAGAAAGCATCACAAGTTCTCTATTTACATTTTGCTTTGAAGAAACGTGCATTAATTGAAGAATTTCATGAGAAACAAGAACAGGTAAAAGAATGGCTACAAAGTTTAGGAATAGTAGATCAAACAGCCATGGTGCAAGATGATGAAGAACCTGATGACGGAGCTGTTCCCTTACATCATGAAGACAGTATTAAGAACAGATATGTTCCATCTGCTGCTGCCCTACCTATCATTCGTCCATCACTAGGAGGGCAGCAATCAACTGCAGATAAAGCAAGAGTTGCAATGCAGGGTTACTTGAATCATTTTCTAGGAAACATGGATATTGTCAATTCTCCAGAGGTCTGCAAGTTTTTGGAGGTATCCAAGTTATCCTTTTTACAAGAGTATGGACCAAAACTGAAAGAGGGATATGTAATGGTGAAACATTTATCAAGTATGGAAAGGGATTCAAATGTAACATGCTTCCCATGGCAATTGTTTGGTTTTTGTAATAACAACTGGCAAAAGGTATGGGCTGTTTTGAAACCAGGGTTTTTGGCCTTGCTGGATGATCCTTTCGACAACAAACCACTGGACGTAATTGTTTTTGATGTCCTCCCATCGTCAAATGAAGATAAGGATAAGGGGTCCCCAATTTGTTTGGCTGATCATATAAAGGAATACAATCCTTTAAGATACACATTTCAGGTTACTAGAGGAAATCGGAGCATAAGCTTGAGAACAAGCAGCACAGCTAAAGTAAAAGATTGGGTTGATAAAATCAACGAAACTGGCTTTAGACCTCATGAGGGTTGGTGTCATCCTCATCGCTTTGGTTCATTTGCTCCCATAAGGGGCTTGACTGAAGATGGGAGCCAAGCTCAATGGTTTATAGATGGGCAGGCAGCATTTGAAGCAATTGCCTCTTCAATTCAGGAAGCAAAGTCTGAGATCTTTATTACTGGATGGTGGCTTTGCCCAGAGCTCTATCTGAAACGTCCTTTTCATAGCCATTCTTCCTTTAGGCTGGACAAATTACTAGAACAAAAGGCTAAACAAGGAGTTCAGATCTATGTGCTTCTGTACAAGGAGGTTTCTCTAGCATTAAAAATTAACAGCTTATACAGTAAGAGAAAACTCCTTGACACTCATGAGAATGTGAGGGTATTGCGCTATCCCAACCATTTATCAACTGGTGTCTACTTATGGTCTCACCATGAAAAACTTGTGATTGTTGATTACAATATTTGCTATATTGGAGGATTAGATTTATGCTTTGGCCGTTATGACACAACTGAACATAAAGTGGGTGATTTCCCCTCTGAAATATGGCCTGGAAAAGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGTAGAGACCATGAAAGATGAATTGAATCGTGAAAAGTATCCCCGCATGCCTTGGCACGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGACACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTGAAGCTCCAAATGAAAATACCATTCCACTTCTTATGCCTCACCACCACATGGTCATCCCTCATTACTTGGGAAGAAGCAAAGATATAGACAACATCGacgaaaggaatgaagaagacAACACCGAAGAAACTGACAGTGAGAGTTCGACTTCATTGCAATCACCTAGGCAGCAAGATATACCACTGCTTCTACCTCAAGAAGCTGGTGGGAAAGATCTTAAGTTAATCGTAAACAATATGAATGATAATCCTATTGATCAAACAATATTTTGCGAAAACCAAAAGCCTAGCGATGATACTTCAGAATCAGATGATCAGACGAAAGGTTTTCTTGATGAATTTGATCCTTTTAACTCGGAGACACAATCTGCCATTAACGCTACAGATGATTGGTGGGAAACACCCGAAGAAGGTTACTGCAATGCCACTGCTATAGAATATGGAGAAGTTGGTCCATGTACTACTTGTCGCTGTCAGATAATCAGAAGTGTCAGCCATTGGTCCGCTGGAACAAGTCAGACTGAAGAAAGCATTCACACTGCTTATTGTTCACTTATTGAAAAAGCAAAGCATTTTATCTACATTGAGAATCAATTTTTCATATCGGGCCTGGCAACAGATGATACAATACAGAACCGTGTATTGGAAGCATTATATAGACGTATTATACTGGCCCACAAAGAGCAAAAACCTTTTAGAGTTATAATTGTGATGCCTCTGTTGCCTGGCTTCCAGGGTGGTATGGATGATTTTGGTGCTGCGACTGTGAGAGCCATTACACATTGGCAGTATCGAACAATCTCTAGAGAAAAACACTCCATATTAGACAACCTAAAAGCTTTGCTTGGCCCCAAGACTGATGACTACATTTCTTTCTACGGTCTACGATCTCATGGTAGACTTTTTGCTGGTGGCCCTATAGCTACAAGTCAGGTATATGTTCACAGCAAATTGATGATAATAGATGACCGTGCTGCTATTATCGGATCTTCTAATATAAATGATAGGAGTTTGCTTGGTTCAAGAGACTCTGAGATTGGTGCAGTAATCGAAGATAAAGAGTATGTGGAATCATCTATGAATGGAAAGCCATGGAAGGCTGGGAAATTTTCCCATAGCCTCCGTTGCTCCCTTTGGTCTGAGCACCTTGGTCTGCAAACTGGAGAGGTTAATAAAATCAGTGATCCAGTGGCAGATACAACCTACAAGGGCTTATGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTCTTTGGTTGCATACCCAATGATCAGATACACTCTAGAGCTGCTCTTAGGCAACGCATGGCTCACTGGAAGGAGAAACTTGGTCATAATACTATAGACTTGGGAATAGCCCCTGAAAAAACCAGGCCCGCAGACAGATTGAAGTCTGTAAAGGGTCATCTTGTTTCGTTTCCTTTGGAGTTCATGCGTGAAGAAGATCTAAGACCAGTTTTCAATGAGGGTGAATTTTATGTATCTACTCAAGTATTTTATTAA 3234 0.4103 MSAEPLIERSDAMSETLSTSLSFRQSAEPHWIFEELPMATIVHVSRPDTGDISPILLSYTIELQYKQFKWRLLKKASQVLYLHFALKKRALIEEFHEKQEQVKEWLQSLGIVDQTAMVQDDEEPDDGAVPLHHEDSIKNRYVPSAAALPIIRPSLGGQQSTADKARVAMQGYLNHFLGNMDIVNSPEVCKFLEVSKLSFLQEYGPKLKEGYVMVKHLSSMERDSNVTCFPWQLFGFCNNNWQKVWAVLKPGFLALLDDPFDNKPLDVIVFDVLPSSNEDKDKGSPICLADHIKEYNPLRYTFQVTRGNRSISLRTSSTAKVKDWVDKINETGFRPHEGWCHPHRFGSFAPIRGLTEDGSQAQWFIDGQAAFEAIASSIQEAKSEIFITGWWLCPELYLKRPFHSHSSFRLDKLLEQKAKQGVQIYVLLYKEVSLALKINSLYSKRKLLDTHENVRVLRYPNHLSTGVYLWSHHEKLVIVDYNICYIGGLDLCFGRYDTTEHKVGDFPSEIWPGKDYYNPRESEPNSWVETMKDELNREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTEAPNENTIPLLMPHHHMVIPHYLGRSKDIDNIDERNEEDNTEETDSESSTSLQSPRQQDIPLLLPQEAGGKDLKLIVNNMNDNPIDQTIFCENQKPSDDTSESDDQTKGFLDEFDPFNSETQSAINATDDWWETPEEGYCNATAIEYGEVGPCTTCRCQIIRSVSHWSAGTSQTEESIHTAYCSLIEKAKHFIYIENQFFISGLATDDTIQNRVLEALYRRIILAHKEQKPFRVIIVMPLLPGFQGGMDDFGAATVRAITHWQYRTISREKHSILDNLKALLGPKTDDYISFYGLRSHGRLFAGGPIATSQVYVHSKLMIIDDRAAIIGSSNINDRSLLGSRDSEIGAVIEDKEYVESSMNGKPWKAGKFSHSLRCSLWSEHLGLQTGEVNKISDPVADTTYKGLWSATAKENTRIYHEVFGCIPNDQIHSRAALRQRMAHWKEKLGHNTIDLGIAPEKTRPADRLKSVKGHLVSFPLEFMREEDLRPVFNEGEFYVSTQVFY 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0227 1077 SMART PH_update 206 335 IPR001849 -
Sto8g0227 1077 Gene3D - 206 333 IPR011993 -
Sto8g0227 1077 CDD PLDc_vPLD1_2_yPLD_like_1 361 505 - -
Sto8g0227 1077 MobiDBLite consensus disorder prediction 661 693 - -
Sto8g0227 1077 SUPERFAMILY PH domain-like 235 331 - -
Sto8g0227 1077 Gene3D Endonuclease Chain A 355 592 - -
Sto8g0227 1077 SUPERFAMILY Phospholipase D/nuclease 724 931 - -
Sto8g0227 1077 ProSiteProfiles PH domain profile. 205 333 IPR001849 -
Sto8g0227 1077 SMART pld_4 468 495 IPR001736 GO:0003824
Sto8g0227 1077 SMART pld_4 884 911 IPR001736 GO:0003824
Sto8g0227 1077 Pfam PLD-like domain 757 930 IPR025202 -
Sto8g0227 1077 PANTHER PHOSPHOLIPASE D ZETA 2 21 1073 - -
Sto8g0227 1077 SUPERFAMILY Phospholipase D/nuclease 321 588 - -
Sto8g0227 1077 Pfam Phospholipase D Active site motif 468 495 IPR001736 GO:0003824
Sto8g0227 1077 CDD PH_PLD 183 331 - -
Sto8g0227 1077 CDD PLDc_vPLD1_2_yPLD_like_2 744 928 - -
Sto8g0227 1077 Gene3D Endonuclease Chain A 715 946 - -
Sto8g0227 1077 MobiDBLite consensus disorder prediction 671 685 - -
Sto8g0227 1077 MobiDBLite consensus disorder prediction 609 632 - -
Sto8g0227 1077 PANTHER PHOSPHOLIPASE D 21 1073 IPR015679 -
Sto8g0227 1077 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 884 911 IPR001736 GO:0003824
Sto8g0227 1077 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 468 495 IPR001736 GO:0003824
Sto8g0227 1077 PIRSF PLD_euk 595 1077 IPR016555 GO:0004630|GO:0006654|GO:0048017
Sto8g0227 1077 PIRSF PLD_euk 25 630 IPR016555 GO:0004630|GO:0006654|GO:0048017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0227 Sto-Chr8 1517398 1523895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0227 32 1077 Phospholipase D Gene Family (Wang group) AT3G05630 66.291 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0227 K01115 - gmx:100796914 1674.45