Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0218 ATGCGCGATGAAGAAGCCGCACAGAGAAGGAAGAGACTGGCCATTATTGGCGTGTCAAGCTTCTTGCTGGTGGCGATGACGGTGGCTGTGACAGTGGGTGTGACCTTGAATCAAGACGAAGCCGAAGAAACAGAGCTTCCAAATGACAGCAACAAGTCCCACATCTCCGACTCAATGAAGGCCGTGGCAGCCATCTGCCGTCCCACCGATTACAAAGAAGATTGCATGCAGAGCCTCAAGTCCGAAGCCGGCAACACTACCGACCCTAAAGAACTCATCAAGATTGTGTTCAACGTCACCATTCGCTCCGTGGGCGAGAGTCTCAAGAAGACCGAGGAAGTCCACGAACTGGAGAAAGATCCCCGATCTAAGATGGCACTGGACACCTGCATGAACCTCATGAGTCTGTCCATCGGAGAGTTCCGGAAATCCGTGGAGAACATGGGTTCCTTCGATCTCACCGGCGTAGACGTCATGCTCATGAACTTGAAGGTTTGGATCAGTGGCTCCATCACTTATCAGCAGACCTGTTTGGACGGATTTCAGAATACCACAACCCCAGCAGGACAGAAGATGAAGGAGATTTTGAAACTGACGATGCAGAGGAGCAGCAACGTGCTTGCCATCATCAACGATTTCGCCAATTCCCTGGCTGAATTGAACATATCAGGTTTCGCCAGCAGTAACTCACGCCGACTCCTCAATattaatgatgatgatggtttCCCAACTAGAAGACTGCTTGCTACGGCCAAGCTGAAGCCCCATGTGGTGGTAGCCAAAGATGGGTCGGGAAAAGTGAGAAGCATCAACGAAGCTTTGAAGCTGGTGCCTCCGAAGAACCTCAAGCCATTCATCATCTACATTAAGAAGGGCACATACCATGAGAATGTTCGTGTTTTCAAGAACATGTCCCACGTCGTGATGATTGGTGATGGGGGCGACAAGACCCGAATCACTGGCAACCTAAACTTCATCGACGGCGTGAATACCTATAGAACCGCGACGGTTGCAATTGAAGGGGATTTCTTTGTTGCAATCAAGATGGGGTTCGAGAACTCAGCAGGGGCGTCAAAGCACCAAGCAGTGGCGCTGAGGGTACAGGGTGACATGGCAGTGTTCTACAAATGCAGCATGGATGGGTACCAGGACACACTCTACGCACACGCCATGCGACAATTCTACAGGGACTGCACCATCTCCGGAACCATAGACTTCGTATTCGGAGATGCGGTTTCGATGTTCCAGAATTGCACGTTCGTGGTGCGGAAGCCCATGAAGGGGCAGAAATGCGTGGTGACGGCACAAGGCAGGAAGGAGAGGCACCAGCCATCGGGGATCGTCATCCAAGGAGGCTCCATCGTGGCGTCTCGGGAGTTGAAGGAGGAAAAGAAGAATTTTCCCACATACCTGGCACGCCCATGGAAGACATACTCCAGAACCATATTCATGAATACGTACATAGATGACATAGTGGTGGCGGAGGGGTACATGCCATGGGCGGGGGATTTGGGGCTCGACACATGCTACTACGCAGAGTACAAAAACGAGGGGCCTGGATCAGATAAATCAAAGAGAGCAAAATGGGGTGGGATTAAGAAGAATTTCACATCGCAACAGGCAGATACTTACACACCTGTCAAATTCTTTAGCGGAGATAAGCGTCGGCATCGTACTCGCCGAGACCGAGATAAAGAATCTCTAAAGATCCGCAAGAAGACCAAATCCCATCCCAAGCGTCGTCGTAGGCATCACCGCTCCTCTGACTCCTATTCCTCTGATTCCACCTCCGATTACTCCAGTGAGAGTTCTTCTGACAGTGAGCGTGATACATCTCATCATTCAAAAAGGCACAAAAAGAATGACAGACCAAAGAAGAACAAGGAAAAAGATCGAAGTAAAAGCCATCAGCATAAACGGCGGAAGCATAAAGTGAAAGagTTTTTGGGGCGTGACAAAGATGATGGTGTCCGTCGCAGTGCTGTATCCGGCAAGAAGGTTAAAGCTGTCATGTCATAG 2019 0.4983 MRDEEAAQRRKRLAIIGVSSFLLVAMTVAVTVGVTLNQDEAEETELPNDSNKSHISDSMKAVAAICRPTDYKEDCMQSLKSEAGNTTDPKELIKIVFNVTIRSVGESLKKTEEVHELEKDPRSKMALDTCMNLMSLSIGEFRKSVENMGSFDLTGVDVMLMNLKVWISGSITYQQTCLDGFQNTTTPAGQKMKEILKLTMQRSSNVLAIINDFANSLAELNISGFASSNSRRLLNINDDDGFPTRRLLATAKLKPHVVVAKDGSGKVRSINEALKLVPPKNLKPFIIYIKKGTYHENVRVFKNMSHVVMIGDGGDKTRITGNLNFIDGVNTYRTATVAIEGDFFVAIKMGFENSAGASKHQAVALRVQGDMAVFYKCSMDGYQDTLYAHAMRQFYRDCTISGTIDFVFGDAVSMFQNCTFVVRKPMKGQKCVVTAQGRKERHQPSGIVIQGGSIVASRELKEEKKNFPTYLARPWKTYSRTIFMNTYIDDIVVAEGYMPWAGDLGLDTCYYAEYKNEGPGSDKSKRAKWGGIKKNFTSQQADTYTPVKFFSGDKRRHRTRRDRDKESLKIRKKTKSHPKRRRRHHRSSDSYSSDSTSDYSSESSSDSERDTSHHSKRHKKNDRPKKNKEKDRSKSHQHKRRKHKVKEFLGRDKDDGVRRSAVSGKKVKAVMS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0218 672 Pfam Plant invertase/pectin methylesterase inhibitor 61 209 IPR006501 GO:0004857
Sto8g0218 672 SMART PMEI_2 57 209 IPR006501 GO:0004857
Sto8g0218 672 MobiDBLite consensus disorder prediction 572 586 - -
Sto8g0218 672 MobiDBLite consensus disorder prediction 549 571 - -
Sto8g0218 672 MobiDBLite consensus disorder prediction 546 672 - -
Sto8g0218 672 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 213 IPR035513 -
Sto8g0218 672 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 213 IPR035513 -
Sto8g0218 672 CDD PMEI-like_3 64 215 - -
Sto8g0218 672 Pfam Pectinesterase 256 553 IPR000070 GO:0030599|GO:0042545
Sto8g0218 672 PANTHER PECTINESTERASE 11 557 - -
Sto8g0218 672 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Sto8g0218 672 SUPERFAMILY Pectin lyase-like 253 558 IPR011050 -
Sto8g0218 672 Gene3D - 250 563 IPR012334 -
Sto8g0218 672 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 211 IPR006501 GO:0004857
Sto8g0218 672 MobiDBLite consensus disorder prediction 647 662 - -
Sto8g0218 672 MobiDBLite consensus disorder prediction 616 646 - -
Sto8g0218 672 PANTHER PECTINESTERASE 11 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0218 Sto-Chr8 1476705 1483605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0218 4 553 Carbohydrate Esterase AT3G05610 47.321 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0218 K01051 - gmx:100794799 676.011