Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0184 ATGCTGACATTGAGGGATTGTCATGCTCTGTTTACTTCTCTTGATGCTGAGTATGGGAAGAAAACTCTTGAGCTTATCAAACGCATCGACCATGATAATTTCCAGTTGCTCAAGAAAATCAGGAAAAGAATAGACAAGGCTGTAGAGGTGAGCAACAACAATGATGGGCAAGTTATTGTCCTTCTAAAGctgaaatggaataaaaagaaTTCTCCATCCAAAATGGGAGTAGACTTGTACTTACTCACTTGCTGGGTGTTGGAGTTCCTTCAACTGCCTATCACATATCCAATGAATGGATATTATGGTTCAGCTTACAAGCTTTTCTGTGATCGGAGGTTGCTTTCTCCAGAACCAGAAACCATCTCTCAGTCTCACTGCTACAACAACGGCCGTCAAGTCATATTCATTGAAAAGACGGTTACGTCCTCTGCTACCCTTTCCCACGTGTTATTGATGAATCGGACGTGGGGTTTTTCTTCGCAATCGGACTTCCTCTCAGCTTTGATCATTGAGTTAATCAGTGCGATTCCTTTTGATTTCGGAGCCAAGTGGATTTTCACTCCTCAACAGCTGTATGGAGCAACTCTTATGGAAGTAGATGTTGACGGGACTTTGTCATATCCTGTACTCCAGAAAGACAATGCTGAAAAGCATTCTCGCCCTAAACCCCTCAGTATTGAAGAGGAACAATGTATAAGAGTATTTTATGAAAACAAATTGCAAGAAGTGTGTAACAATTTTCACTTTCCTCATAAAATCCAGGCCACGgcactcatttattttaaaaggttCTATCTGCAGTGGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCTGCTGAGGAGCTTGGTAAGGGGATCTCACAGGATCACCAAATGATTCTCAATAATGAGATGATTAGTTTAGAATTTGACCTTATTGTGTATGCTCCATATCGCTCAGTTGAAGGTTTTGTAAATAATATGGAGGACTTTTGTAAAGCCGGTGATGAACTGCTTCAAATGCTGAAGGCCTTGCAAGACACAGCAAGATTGGAAGTTGACAAAATGATGCTTACGGATGCACCACTTTTGTTTCCTCCTGGGCAGTTAGCGTTGGCTGCTTTGCGTAATTCAAATGTACTTCACAAAGTTCTCGACTTTGAGAGTTATCTAAATAGCATCATTTCCCACCAGAATCACATGCATACTGTTTCTGAGCTTATTGGATCGTTGAATGCAATTGATTCTTGGgtaaagaaatataaatttccTTCAGAGAAAGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGCTGGGGTCTTAGCTCACATGACGAGTATTTTCTGTACCCTTACACCgcgttcctttttttttttttttttgagagttCTGCTAAATTTCCTTTTGTTTTAATGTGCTATACTGATGCTGGTGGCTTCGCAGGGGAGGACTGCACTGCCTTTAAGGGAGGCTATCATTTTCATGATGCAAAAGATTGA 1503 0.3879 MLTLRDCHALFTSLDAEYGKKTLELIKRIDHDNFQLLKKIRKRIDKAVEVSNNNDGQVIVLLKLKWNKKNSPSKMGVDLYLLTCWVLEFLQLPITYPMNGYYGSAYKLFCDRRLLSPEPETISQSHCYNNGRQVIFIEKTVTSSATLSHVLLMNRTWGFSSQSDFLSALIIELISAIPFDFGAKWIFTPQQLYGATLMEVDVDGTLSYPVLQKDNAEKHSRPKPLSIEEEQCIRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMISLEFDLIVYAPYRSVEGFVNNMEDFCKAGDELLQMLKALQDTARLEVDKMMLTDAPLLFPPGQLALAALRNSNVLHKVLDFESYLNSIISHQNHMHTVSELIGSLNAIDSWVKKYKFPSEKELKHINRKLKSCWGLSSHDEYFLYPYTAFLFFFFFESSAKFPFVLMCYTDAGGFAGEDCTAFKGGYHFHDAKD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0184 500 SUPERFAMILY Cyclin-like 218 314 IPR036915 -
Sto8g0184 500 CDD CYCLIN 234 289 IPR013763 -
Sto8g0184 500 Gene3D - 315 420 - -
Sto8g0184 500 PANTHER CYCLIN 211 448 IPR043198 GO:0006357|GO:0016538
Sto8g0184 500 Pfam Cyclin C-terminal domain 317 419 IPR031658 -
Sto8g0184 500 PANTHER CYCLIN-H 211 448 - -
Sto8g0184 500 SUPERFAMILY Cyclin-like 317 441 IPR036915 -
Sto8g0184 500 SMART cyclin_7 239 309 IPR013763 -
Sto8g0184 500 Gene3D - 207 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0184 Sto-Chr8 1226277 1232337 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0184 183 418 Core Cell Cycle Gene Families AT5G27620 56.667 7.27e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0184 K06634 - mnt:21409806 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0184 8 1226277 1232337 Sto8g0184 8 1226277 1232337 ECH