Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0162 ATGGTACTAGAAGCAGTGTTGTATCCACATGAAGCTGAAGATCCATTTGCTAACTATGGCGCCAAAGATGTGTTGTACAACTACTATGAGTATGAACAACACCAGCAGGGCCAGGGCCAGGGTCACGCCTCTTCTTCCTCCCTCGACAACCAAACACAAAATAATTGGGATTCCACGATGTTATTACCCCAATATCCCTGCTCTTGCTCTGACACCACCACCAATTATTCAATTCCCAACTTAGACACTGCTTCTCGTCCCAAGAGACGCAGACCCAAAACCAGAAAGAACAAGCAACAAATTGAGAATCAGAGAATGACTCACATTGCTGTCGAGCGCAATCGAAGGAAACAGATGAATCACTATCTCTCTGTTCTTCGCTCTTTAATGCCACAATCCTACGTCCAAAGGGAGCTTGAGCAGAAGCTGCAGTTTCTTGGCACTACTGATCAGGGCAAAGGGAAAAGCAACACAGAAGAACCAAACAATTTGCCCTTCTCCGACTTCTTCACATTTCCTCAGTACTCTCGTACTGAACTAGAAGTTGAATGTGGGAGTGGTATTGCAGACATACAAGTGACAATGGTCGAAACCCACGCAAATCTCAAAATAAGATCCAAGAAGCGCCCAAAGCAGCTCTTCACCATCGTCTCTGCTTTGCATACCATGCGTCTCACTATCTTGCATCTCAATGTCACTACCGCTGCTCAAATTGTCCTCTATTCTCTCAGTGTTGAAGAAGATTGCAAGCTGGGTTCAGTGGATGACATAGCCGCCGCTTTATTTCAAATGATGGATACCATTCATCAGGAGGCAATGCTTTTGAACAATTAA 834 0.4484 MVLEAVLYPHEAEDPFANYGAKDVLYNYYEYEQHQQGQGQGHASSSSLDNQTQNNWDSTMLLPQYPCSCSDTTTNYSIPNLDTASRPKRRRPKTRKNKQQIENQRMTHIAVERNRRKQMNHYLSVLRSLMPQSYVQRELEQKLQFLGTTDQGKGKSNTEEPNNLPFSDFFTFPQYSRTELEVECGSGIADIQVTMVETHANLKIRSKKRPKQLFTIVSALHTMRLTILHLNVTTAAQIVLYSLSVEEDCKLGSVDDIAAALFQMMDTIHQEAMLLNN 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0162 277 Gene3D - 93 153 IPR036638 GO:0046983
Sto8g0162 277 MobiDBLite consensus disorder prediction 76 102 - -
Sto8g0162 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 103 155 IPR011598 GO:0046983
Sto8g0162 277 MobiDBLite consensus disorder prediction 36 57 - -
Sto8g0162 277 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 274 - -
Sto8g0162 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 102 140 IPR036638 GO:0046983
Sto8g0162 277 PANTHER MAX DIMERIZATION, MAD 1 274 - -
Sto8g0162 277 Pfam Helix-loop-helix DNA-binding domain 104 139 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0162 Sto-Chr8 1068522 1069573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0162 1 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 42.808 5.80e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto8g0162 HLH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0162 - - gmx:100779213 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0162 8 1068522 1069573 Sto8g0162 8 1068522 1069573 ECH