Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0143 ATGGGTTGTGTAATTAGTCGAGAAGTATCATCGGGAATAATATCCGAGAAGAGGAAAGTAGATGAGGTATCGGCGAGGAGCGTGACAGAGGATGAGGATCAGAACGGTGGGAAccaaaaggaagagaagggtGATGATGAAGGGATCGAGGTGGTTCAGAAGGCAAGGGGCGAAAGAAGAAGATCAAAGCCGAACCCAAGGCTCAGTAATCCACCCAAACATTTGCGAGGCGAGCAAGTAGCAGCTGGGTGGCCACCATGGCTTACTGCAGTTTGTGGGGAAGCACTCAGTGGATGGATTCCTCGAAAGGCTGACACATTTGAGAAAATTGATAAGatTGGTCAAGGAACGTATAGTAATGTGtacaaggcaaaagacatgTTGACTGGTAAAATTGTTGCCCTAAAGAAGGTTCGATTTGACAATTTGGAGCCGGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTCTGCGGAGATTGGATCATCCAAATGTTGTGAAATTGGAAGGTTTAGTCACATCGAGGATGTCGTGTAGTTTGTATCTGGTATTTGATTACATGGTTCATGATTTAGCTGGACTAGCTGCAAGCCCTGGAGTCAAGTTCACAGAGCCTCAGGTCAAATGTTACATGCATCAACTGCTTTCTGGACTTGAACACTGTCATAAACGGCACATACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACGATGGAGGAATACTTAAGATTGCTGACTTTGGACTGGCCTCTTTCTTTGATCCAAACCACAAGCATCCCATGACTAGTCGTGTAGTTACCCTTTGGTACCGACCTCCTGAGTTGCTTCTTGGTGCCACAGATTATGGTGTGGGCATTGACCTCTGGAGTGCAGGTTGCATTTTAGGAGAGTTACTGGCTGGGAAGCCTATAATGCCTGGTCGTACAGAGGTAGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCAAATGCTACCTTATTTAAACCTCGAGAACCATACAAGAGATGCATAAGGGAGACATTTAAAGATTTTCCACCTTCTGCACTGCCCCTTATTGATACTCTTCTTGCAATTGATCCTGCTGAACGAAAGACTGCCTCGGATGCCTTAAAAAGTGAGTTTTTCACGACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATATCCCCCTAGCAAGGAAATGGATGCTAAACGACGGGATGATGAAGCTAGGAGGTTAAGAGCTGCAAGCAAAGCCCAGGTTGATGGTGCAAAGAAACCACGGACACGTGAGCGTGTTAAAGCTATGCCTGCTCCTGAAGCCAATGCCGAACTTCAATCTAATATTGATAGAAGGCGTCTGATCAGTCATGCAAATGCTAAGAGCAAGAGCGAAAAGTTTCCTCCACCACATCAAGATGCACAGCTTGGGTATCCTTTGGGAGCTTCAAATCATATAGATCCAGACATTGTTCCTCCTGATGTCTCTTTCAGTACAACCTCATTTACTTATTCAAAGGAACCATTCCAAGCTTGGTCTGGTCCCATAGGTAATTCTGGTGCCTTTGATGcaccaaagaagaagaagaaaaaacacaCTGCAGCTGATACATTGGATTTATCAAACCCACACACTGTTTCCCTCAAGGATAAAATTAAAGGCAAGAAAATCAAAGCCTAG 1713 0.4244 MGCVISREVSSGIISEKRKVDEVSARSVTEDEDQNGGNQKEEKGDDEGIEVVQKARGERRRSKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMVHDLAGLAASPGVKFTEPQVKCYMHQLLSGLEHCHKRHILHRDIKGSNLLIDDGGILKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASDALKSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEARRLRAASKAQVDGAKKPRTRERVKAMPAPEANAELQSNIDRRRLISHANAKSKSEKFPPPHQDAQLGYPLGASNHIDPDIVPPDVSFSTTSFTYSKEPFQAWSGPIGNSGAFDAPKKKKKKHTAADTLDLSNPHTVSLKDKIKGKKIKA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0143 570 MobiDBLite consensus disorder prediction 15 65 - -
Sto8g0143 570 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Sto8g0143 570 PANTHER CELL DIVISION PROTEIN KINASE 41 545 - -
Sto8g0143 570 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Sto8g0143 570 CDD STKc_CDK9_like 107 391 - -
Sto8g0143 570 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0143 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Sto8g0143 570 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0143 570 MobiDBLite consensus disorder prediction 519 551 - -
Sto8g0143 570 SUPERFAMILY Protein kinase-like (PK-like) 102 398 IPR011009 -
Sto8g0143 570 PANTHER OS01G0367700 PROTEIN 41 545 - -
Sto8g0143 570 MobiDBLite consensus disorder prediction 399 463 - -
Sto8g0143 570 Gene3D Transferase(Phosphotransferase) domain 1 190 431 - -
Sto8g0143 570 MobiDBLite consensus disorder prediction 15 79 - -
Sto8g0143 570 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0143 570 MobiDBLite consensus disorder prediction 409 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0143 Sto-Chr8 958168 961966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0143 99 431 Core Cell Cycle Gene Families AT5G10270 52.149 4.33e-121 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto8g0143 Pkinase 6.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0143 K08819 - gmx:100786837 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3945 13 40423965 40428013 Sto8g0143 8 958168 961966 ECH
Sto8g0143 8 958168 961966 Sto8g0143 8 958168 961966 ECH