Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0127 ATGGGTGGTTATCTGACTGATGCGGGTGAGGTTTTCTTGGATAGAGTGGAGCATTTTATCCAATCTGTCTCCGTTTATGAGGATCAAATCTTTCAGAAACGAGTTCGAATTCAGCAGGCTGCAGAAAATAATGAAGATATGAGAGCTAGGGCAAGAGGAGAAGTGCCTGAAGGGCCTCGGGCTTCAGTTCTTGATAAGGTTAAGTTAGGGGAGCCTGGATACAAGGAAAGGTACTATGCTGAAAAGTTTGGGGTGTCAGGCCTGGAGGAGATTGACAAAATTAAGAAGGATTTGGTTTTGAAATATGTGGAAGGCCTATGTTGGGTTTGCCGGTACTACTATCAGGGTGTTTGCTCATGGCAGTGGTTTGGTTTATACCAGCAGAGGGTCAATCTCTTACTTATTGAAGACATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCTCTTCTTGTGAGGCATAAGCATGagaagaaaaaATATGTGCTGAAGAAAATTCGCCTTGCCCGCCAAACTGAGCGATCTCGTAGATCTGCACACCAGGAGATGGAGCTCATCTCTAAATTCAGAAATCCTTTTATTGTGGAGTACAAAGATTCGTGGGTAGAAAAGgGTTGCTATGTGTGCATTATCATAGGTTACTGTGAGGGTGGAGATATGGCAGAAGCTATAAAGAAAGCTAACGGTGTTCTTTTTCCAGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACCTGCACATGAACCATATTCTTCATCGTGATGTCAAGAAGATTGAAAATTTGCTTACAAGTTATCATGATGAAGCAGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTCGCTTCATCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTTCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCTTTGGGATGTTGTATATATGAAATGACAGCCCATAAGCCTGCATTTAAAGCATTTGATATACAAGCACTAATTAACAAGATTAATAAATCCATAGTGGCTCCGCTGCCAACGAAGTATTCTGGTGCATTTCGAAGTCTAGTTAAAAGCATGCTGCGGAAAAATCCAGAACTAAGACCTAGTGCTGCGGAGCTACTTGGGCACCCTCATCTTCAACCTTATGTTCTCAAGATCCATCTCAAAATCAGTAACCCCAGGCGAAATACACTCCCAGCCCATTGGCCAGAATCTCACTACTTGAAGAAAACTAGATTTTTGGAGCCAGAAGTTGATTCTGTTTCTTTTTACAGGGATAAGCATCATTCTTTCTGCAATGATCGGACTTTAAATCCTAGCATATCTGGAGCTGAGCAAGATTCTGTATGCTCTACCCTAGAAATTGATTGCACCCCAGATTATTTGAATCCCCGGTTAGCAGAACTTTGTGTTGGGGATAGCTCTGAAGTGAAAACAATCCCCAAGCGAGTTGTTTCCAAAACTTCTAGTGTTGCTAAGACTCCACGACTGACTTCATCAAAAGCTTCTGCGAGTCCTAAGAAACCAATGGAGTGTTCAAAGAATCGTGATCCGGTAAGACATGCTCTTCCTATTTCACGCAATGTCAGAAAATCAGTCCATACAACTCGCAGTCGCAGAGCATCTTTTCCATTGTCTACAAGAAGTGGTATTCAACAATCTTCTCGCACGCTTGGTGTTCTTGGCCATACAAAATCCCCCGATATTTCAGTCAACTCTCCCCGAATAGATAGAATGGCTGAATTCCCATTGGCGTCCTATGAGGATCCACTGTTTCCCGTTAACAGAACTTCTTCAACCTCTGCACAGGGTTCCTTGGGCTCCCCACCTTGTGGTGACCGTTCAATCATGAAAGATAAATGCACAGTTCAGGTATGCGACAGAGCCACTGTGAGGCCTAGATTGTATCAGGAAAATGATGAGGTGAAAAGTGGCTCCTCTGATCAAAATGCAACTGCTGGAGCGTCAAGCCGTACCTCTTCAGATTGGCGCCGTCGGCATTTTGACACATCATCATACCAACAAAGGGCTGAAGCCTTGGAAGGGTTGCTTGAATTTAGTGCAAGGTTGCTACAACAAGAAAGGTATGACGAACTTGGGGTTTTGTTGAAACCATTCGGGCCTGGGAAGGTCTCCCCTCGGGAAACTGCTATTTGGTTGAGTAAGAGCTTCAAGCAGAATACTCATAACCAGGAGGAATCCCTTTGA 2253 0.4323 MGGYLTDAGEVFLDRVEHFIQSVSVYEDQIFQKRVRIQQAAENNEDMRARARGEVPEGPRASVLDKVKLGEPGYKERYYAEKFGVSGLEEIDKIKKDLVLKYVEGLCWVCRYYYQGVCSWQWFGLYQQRVNLLLIEDMEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKKIENLLTSYHDEAGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRSLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKISNPRRNTLPAHWPESHYLKKTRFLEPEVDSVSFYRDKHHSFCNDRTLNPSISGAEQDSVCSTLEIDCTPDYLNPRLAELCVGDSSEVKTIPKRVVSKTSSVAKTPRLTSSKASASPKKPMECSKNRDPVRHALPISRNVRKSVHTTRSRRASFPLSTRSGIQQSSRTLGVLGHTKSPDISVNSPRIDRMAEFPLASYEDPLFPVNRTSSTSAQGSLGSPPCGDRSIMKDKCTVQVCDRATVRPRLYQENDEVKSGSSDQNATAGASSRTSSDWRRRHFDTSSYQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPGKVSPRETAIWLSKSFKQNTHNQEESL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0127 750 PANTHER SERINE/THREONINE-KINASE NEK4 138 735 - -
Sto8g0127 750 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
Sto8g0127 750 MobiDBLite consensus disorder prediction 500 521 - -
Sto8g0127 750 Gene3D Transferase(Phosphotransferase) domain 1 223 439 - -
Sto8g0127 750 SUPERFAMILY Protein kinase-like (PK-like) 124 427 IPR011009 -
Sto8g0127 750 CDD STKc_Nek 140 394 - -
Sto8g0127 750 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Sto8g0127 750 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 138 735 - -
Sto8g0127 750 MobiDBLite consensus disorder prediction 545 565 - -
Sto8g0127 750 MobiDBLite consensus disorder prediction 652 681 - -
Sto8g0127 750 MobiDBLite consensus disorder prediction 500 530 - -
Sto8g0127 750 ProSiteProfiles Protein kinase domain profile. 141 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0127 750 Pfam Protein kinase domain 141 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0127 750 MobiDBLite consensus disorder prediction 657 674 - -
Sto8g0127 750 MobiDBLite consensus disorder prediction 610 629 - -
Sto8g0127 750 Pfam Xrn1 helical domain 1 50 IPR041412 -
Sto8g0127 750 Pfam Xrn1 helical domain 62 124 IPR041412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0127 Sto-Chr8 858373 872725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0127 147 395 MAP Kinase Kinase Kinase AT1G53570 31.250 2.15e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Sto8g0127 Pkinase 2.3e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0127 K08857 - gmx:100804898 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0127 8 858373 872725 Sto8g0127 8 858373 872725 ECH