Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0116 ATGGATAGAGTGTTCTCAGTGGATGAAATTTCAGATCAGTTTTGGTCGCCTCCGATTGCCACCGGGAAGGTTGAATCCTCCGCCATGAATCGTAGTGCTTCCGAGTGGGCCTTCCAGCGATTCCTCCAGGAAGCTTCTTCTGACACCTCTCACCCTTCTCCTTCATCCGATCTTGACAAAAACGACGACCTTATCCTTGAAATCAAGCAAccaccaaatcccaaacccaaacccgagCAGACCCCTCCGACTGTTCATAATAAGAATGGTCCTCCTCCTTCTAACATTTCCGTTGATTCCGAGCAGTACCAGGCTATCCTCAAGAGCAAACTCGATCTCGCTTGCGCTGCCGTTGCCTTGTCTCGGGGATCTTTAGTCAAATCTCAAGACCCAGCTTCTTTTCCGGATGGCGTATCACAGGCGCATAATCCTTCTAAAGGTGGATTTCCTGCTACTCTAGAAGGATCTGGGCCTTCGGGAAATGATCCATCTAATATACATGATAAAGTTGCGAAAGGACCAGTTGGCATTCCTTCCTTGCCTGCCAATCAAAAGAAACCTGTAGTTACAACCAGACCGACAACTAGTGGATCGTCAAGGGAACTGTCTGATGATGAGGAGGCTGAAGGAGAAATTGATATGACTGAAAATATGGACCCTGCTGATGCAAAACGTGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAAACACAGGTTTCTCAATTAAAAGGTGAAAATTCATCCTTGTTAAAGCGCCTTACTGATATAAGCCAGAAGTACAATGAAGCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTTGAAACTATGAGAGCAAAGGTAAAGATGGCAGAAGAGACTGTCAAAAGAATTACTGGGTTAAACCCAATGTTTCATGCCATGTCGGAGATACCAATGGGTATGCCATCATTTGATGGAAGCCCTTCCGACACGTCAACAGATGCAGCTGTACCTGTGCAGGACGACCCAAACCATCACTTTTATCAGCTCACTTCTAATAATTCGTTGTGTGGGCATGATCTGAGAGTCAACAATGGAGCGGGGGATATTTCTTCCATTGAAAATGTGCAGAAGAACAATGCAGCAATTGTAGCTGGGAACAAGATGGGGCGAACTGCTTCCATGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATCCGTGGTGGTGCAGATTCTTGTGTGCCTCCAACGAATGGAGAGCAGCCAGTGATCATGGCCGTCCAAGTCAAGATATTCTTCTGGCTCATTCGCCTGAATATGGATAAAGCACTATCAAGACATCCACATTTGGAGTACATGTCCACAAGCCCAGTGCCAATATACACATCATCTTCGGGAATACATATCGTCTTCTCTGCAAATCCATGTATGGAAGCACCTGTTTCTAGCATACCCAATTGA 1473 0.4508 MDRVFSVDEISDQFWSPPIATGKVESSAMNRSASEWAFQRFLQEASSDTSHPSPSSDLDKNDDLILEIKQPPNPKPKPEQTPPTVHNKNGPPPSNISVDSEQYQAILKSKLDLACAAVALSRGSLVKSQDPASFPDGVSQAHNPSKGGFPATLEGSGPSGNDPSNIHDKVAKGPVGIPSLPANQKKPVVTTRPTTSGSSRELSDDEEAEGEIDMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLKGENSSLLKRLTDISQKYNEAAVDNRVLKADVETMRAKVKMAEETVKRITGLNPMFHAMSEIPMGMPSFDGSPSDTSTDAAVPVQDDPNHHFYQLTSNNSLCGHDLRVNNGAGDISSIENVQKNNAAIVAGNKMGRTASMQRVASLEHLQKRIRGGADSCVPPTNGEQPVIMAVQVKIFFWLIRLNMDKALSRHPHLEYMSTSPVPIYTSSSGIHIVFSANPCMEAPVSSIPN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0116 490 SUPERFAMILY Leucine zipper domain 224 274 IPR046347 GO:0003700|GO:0006355
Sto8g0116 490 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 227 242 IPR004827 GO:0003700|GO:0006355
Sto8g0116 490 MobiDBLite consensus disorder prediction 71 89 - -
Sto8g0116 490 CDD bZIP_plant_GBF1 225 276 IPR045314 GO:0003700|GO:0006355
Sto8g0116 490 MobiDBLite consensus disorder prediction 43 101 - -
Sto8g0116 490 Coils Coil 233 267 - -
Sto8g0116 490 Coils Coil 282 302 - -
Sto8g0116 490 PANTHER BASIC LEUCINE ZIPPER 63 1 406 - -
Sto8g0116 490 Gene3D - 223 279 - -
Sto8g0116 490 PANTHER BZIP TRANSCRIPTION FACTOR 1 406 - -
Sto8g0116 490 MobiDBLite consensus disorder prediction 184 198 - -
Sto8g0116 490 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 222 277 IPR004827 GO:0003700|GO:0006355
Sto8g0116 490 SMART brlzneu 220 284 IPR004827 GO:0003700|GO:0006355
Sto8g0116 490 Pfam Basic leucine-zipper C terminal 291 414 IPR020983 -
Sto8g0116 490 MobiDBLite consensus disorder prediction 124 211 - -
Sto8g0116 490 Pfam bZIP transcription factor 223 276 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0116 Sto-Chr8 792752 797239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0116 1 313 bZIP Transcription Factor Family AT4G02640 41.176 1.72e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto8g0116 bZIP_C 5.2e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0116 K25784 - gmx:100170702 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0116 8 792752 797239 Sto8g0116 8 792752 797239 ECH