Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0114 ATGGCGTGCAATTCGTCGGAGGGATTGGGTGAGGATTTTTTGGAGCAGATCTTGACGGTGCCTTCAGCGTACGGAAGCTGTGAGTTGGGGTCTGGCAGTAGTGGTGGGTTGAGAGAATCCCTAGGAGTAGGAGGGATGGGTATGCCTTTAGGTTTGAATTTGGAGCAAGGTTTTCTCAGACGCTACGGCAATGACGGGAACAATGTCAATAACCACCATCTTCATCTTAATAACACCACTTCTAATTCCTCTTCTACTTCTGGAATCACTGTACCTCAGGAGAGAGATTCATTGCATTTGCATAGGACGAGTGGTTTGTTTTCAGCTTTTGGACCATTGCACCTCCGCCCACCGCCACAACTTCACCATCAGCCCTTTCAGAGCCAACCACCAAATCCAGTGTCTGTTACTACCGTTCCTCAGCCTCCTACCGTCCGCCCTAGAGTGCGAGCAAGAAGAGGGCAAGCCACAGATCCCCATAGTATTGCTGAACGGTTACGCCGTGAAAGAATTGCTGACAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCGCCAATAAGACGGACAGAGCAGCGATGCTTGATGAAATTGTGGATTATGTGAAATTTCTCAGACTCCAGGTTAAGGTCCTCAGCATGAGTAGACTAGGGGGAGCTGGTGCAGTAGCTCAGCTTGTGGCAGACGTTCCTTTATCTGCTGCAGTTGAGGTGAGTGATGAGGGCATTGAAGGAGGAGGAAATGAGCAAGCATGGGAGAAATGGTCGAATGATGGCACAGAAGAAGAAGTTGCAAAACTGATGGAAGAAGATGTTGGAGCTGCTATGCAACTTCTTCAGTCCAAGGCACTCTGCATCATGCCTATATCTCTAGCTTCAGCCATTTTTCGTACGCCTCAATCAGATGCTTCCACACTCATCAAACCTGAATGA 930 0.4849 MACNSSEGLGEDFLEQILTVPSAYGSCELGSGSSGGLRESLGVGGMGMPLGLNLEQGFLRRYGNDGNNVNNHHLHLNNTTSNSSSTSGITVPQERDSLHLHRTSGLFSAFGPLHLRPPPQLHHQPFQSQPPNPVSVTTVPQPPTVRPRVRARRGQATDPHSIAERLRRERIADRMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAAVEVSDEGIEGGGNEQAWEKWSNDGTEEEVAKLMEEDVGAAMQLLQSKALCIMPISLASAIFRTPQSDASTLIKPE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0114 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Sto8g0114 309 Gene3D - 150 212 IPR036638 GO:0046983
Sto8g0114 309 SMART finulus 161 210 IPR011598 GO:0046983
Sto8g0114 309 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 8 300 - -
Sto8g0114 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 214 IPR036638 GO:0046983
Sto8g0114 309 MobiDBLite consensus disorder prediction 118 159 - -
Sto8g0114 309 Pfam Helix-loop-helix DNA-binding domain 160 204 IPR011598 GO:0046983
Sto8g0114 309 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0114 Sto-Chr8 782108 787091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0114 119 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 72.917 4.66e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto8g0114 HLH 3.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0114 - - csv:101216855 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0114 8 782108 787091 Sto8g0114 8 782108 787091 ECH