Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0111 ATGGCTGAAGAGGCGAAGGCTAAAGGTAACGCCGCCTTTTCCTCCGGTGATTTCACTTCTGCCATACGTCACTTTTCCGACGCAATCTCTCTTGCCCCCAATAACCATGTCCTGTACTCTAATCGATCTGCCGCATACGCCTCCCTAAGCAAATTTTCTGAAGCCTTAACTGACGCTCAGAAGACCGTCGAGCTCAAGCCCGATTGGTCCAAGGGTTACAGTCGCCTCGGCGCCGCTCATCTTGGACTCGGCCAACACGATGATGCTATTGCTGCTTATAAGAAAGGCCTTGAGATCGACCCCAATAACGAGCCACTTAAATCAGGCTTGGCTGATGCGCAGGCCGCGGCTTCCAGGTCTCGTCCCGCGCCACCTATGGGTAATCCCTTCGGAGACGCTTTCTCCGGGCCCGAGATGTGGGCTAGGCTTACTGCTGATCCCACCACTAGAGTTTACCTGCAACAACCTGATTTCGTGAAGATGATGCAGGATATTCAGAAAAATCCAAACAATCTCAACTTATATATGAAGGATCAAAGAATCATGCAAGCCCTTGGGGTTTTGCTTAATCTCAAGATTCGTACTCCTAACGAGAGGAAGAGAGCCGCTGAAGCTGAGCCTGCAAAGGAAGAGAAGCAGCCTGAACCTGAGCCTATGGAATTGACGGAGGAGGAGAGGGAATCGAAGGATAAGAAGGCTCAGGCTCAGAAGGAAAAGGAGGCAGGCAATGCGGCTTACAAAAAGAAGGATTTTGAAACTGCAATTCAACATTACTCGAAGGCTATGGAATTGGATGATCAGGATATATCATATCTCACTAACCGCGCCGCTGTTTACCTGGAAATGGGAAAGCTCGAAGAATGCATAAAAGATTGTGACAAGGCTGTTGAAAGGGGAAGAGAATTGAGATCAGACTACAAGATGTTAGCAAGAGCTTTGACAAGGAAGGGAACTGCTCTGGTCAAAATGGCGAAATGCTCAAAGGATTATGACCCTGCCATTGAGACTTTCCAGAAGGCACTTACAGAGCATCGCAACCCTGATACCTTGAAGAAACTTAATGAGGCTGAGAAAGCTAAGAAAGAACTTGAGCAGCAAGAATACTTTGATCCAAAATTGGCTGATGAGGAGCGTGAAAAAGGTAATGAATTCTTCAAGCAGCAAAATTATCCTGAGGCTGTGAAGCATTACACAGAGTCTCTAAGAAGGAATCCTAAAGAACCTAggaCATACAGTAACAGAGCTGCATGTTACACAAAACTTGGGGCATTGCCTGAGGGCTTGAAGGACGCAGACAAGTGTATTGAGCTTGATCCAACCTTCTCAAAGGGTTATACGAGAAAAGGTGCTATACAGTATTTCATGAAAGAATACGACAAAGCTCTGGAAACCTATCAAGAGGGCTTGAAACATGACCCTAAAAACCAGGAGTTGCTTGATGGCATAAAAAAATGTGTAGAACAAATTAATAAGGCTAGCCGTGGGGATTTAAGTCCCGAGGAATTGAAGGAGAGACAGGCAAAGGCAATGCAGGACCCAGAGATACAGAACATCCTCCAAGACCCTGTTATGAGACAGGTATTGGTTGATTTACAGGAAAATCCCAAGGCGGCGCAGGAGCATACAAAGAATCCAATGGTGATGAACAAGATCCAGAAGCTGGTCAGTGCTGGGATTATCCAGATTAGATGA 1692 0.4628 MAEEAKAKGNAAFSSGDFTSAIRHFSDAISLAPNNHVLYSNRSAAYASLSKFSEALTDAQKTVELKPDWSKGYSRLGAAHLGLGQHDDAIAAYKKGLEIDPNNEPLKSGLADAQAAASRSRPAPPMGNPFGDAFSGPEMWARLTADPTTRVYLQQPDFVKMMQDIQKNPNNLNLYMKDQRIMQALGVLLNLKIRTPNERKRAAEAEPAKEEKQPEPEPMELTEEERESKDKKAQAQKEKEAGNAAYKKKDFETAIQHYSKAMELDDQDISYLTNRAAVYLEMGKLEECIKDCDKAVERGRELRSDYKMLARALTRKGTALVKMAKCSKDYDPAIETFQKALTEHRNPDTLKKLNEAEKAKKELEQQEYFDPKLADEEREKGNEFFKQQNYPEAVKHYTESLRRNPKEPRTYSNRAACYTKLGALPEGLKDADKCIELDPTFSKGYTRKGAIQYFMKEYDKALETYQEGLKHDPKNQELLDGIKKCVEQINKASRGDLSPEELKERQAKAMQDPEIQNILQDPVMRQVLVDLQENPKAAQEHTKNPMVMNKIQKLVSAGIIQIR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0111 563 ProSiteProfiles TPR repeat profile. 442 475 IPR019734 GO:0005515
Sto8g0111 563 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Sto8g0111 563 SUPERFAMILY TPR-like 1 114 IPR011990 GO:0005515
Sto8g0111 563 MobiDBLite consensus disorder prediction 198 244 - -
Sto8g0111 563 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Sto8g0111 563 SUPERFAMILY TPR-like 373 486 IPR011990 GO:0005515
Sto8g0111 563 Gene3D Tetratricopeptide repeat domain 373 493 IPR011990 GO:0005515
Sto8g0111 563 SMART CBM 136 175 IPR006636 -
Sto8g0111 563 SMART CBM 512 551 IPR006636 -
Sto8g0111 563 Coils Coil 346 366 - -
Sto8g0111 563 SMART tpr_5 269 302 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 310 347 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 2 35 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 70 103 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 36 69 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 442 475 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 374 407 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 408 441 IPR019734 GO:0005515
Sto8g0111 563 SMART tpr_5 235 268 IPR019734 GO:0005515
Sto8g0111 563 Coils Coil 219 241 - -
Sto8g0111 563 MobiDBLite consensus disorder prediction 198 216 - -
Sto8g0111 563 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Sto8g0111 563 ProSiteProfiles TPR repeat profile. 374 407 IPR019734 GO:0005515
Sto8g0111 563 Pfam TPR repeat 242 283 - -
Sto8g0111 563 Pfam TPR repeat 381 422 - -
Sto8g0111 563 SUPERFAMILY TPR-like 234 362 IPR011990 GO:0005515
Sto8g0111 563 MobiDBLite consensus disorder prediction 222 244 - -
Sto8g0111 563 Pfam Tetratricopeptide repeat 7 65 - -
Sto8g0111 563 Pfam STI1 domain 137 190 IPR041243 -
Sto8g0111 563 Pfam STI1 domain 504 555 IPR041243 -
Sto8g0111 563 Gene3D - 127 193 - -
Sto8g0111 563 ProSiteProfiles TPR repeat profile. 235 268 IPR019734 GO:0005515
Sto8g0111 563 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Sto8g0111 563 PANTHER HSP70-HSP90 ORGANIZING PROTEIN 3 1 562 - -
Sto8g0111 563 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Sto8g0111 563 Pfam Tetratricopeptide repeat 443 475 IPR001440 GO:0005515
Sto8g0111 563 PANTHER TPR REPEAT CONTAINING PROTEIN 1 562 IPR045248 GO:0006457|GO:0030544|GO:0051879
Sto8g0111 563 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Sto8g0111 563 Gene3D Tetratricopeptide repeat domain 232 368 IPR011990 GO:0005515
Sto8g0111 563 Gene3D - 494 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0111 Sto-Chr8 761307 764007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0111 373 469 U-box Gene Family AT3G07370 27.835 6.75e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0111 K09553 - qsu:111986258 919.842