Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0106 ATGGCGAGGCAGGTGGTCAAAGTGAAGAGGGAGACGCTACAAGCATGCATGACATGCCCTCTTTGTCATAACTTGTTCAACGATGCCACTACCATCTCTCTCTGCCTTCACACCTTTTGCAAGAAGTGCATATATGAGAAACTCTCGGATGAAGAGTCAGATTGCTGTCCCGTATGCAATATTGATCTAGGCTGTCTTCCTGTGGAAAAACTGAGGCCAGATCACAATTTGCAAGATATTAGGGCAAAAATATTCCCttataaaagaagaaagatTAAGGTCCCAGAGGTTGTGCCTTCAGTATCTCTGCCAgcaaaaaggaaggaaagatCACTTTCATCATTGGTGATTACTGCACCGAAAGTTCCAATTCAGACTGGCTTCACAGGGAAGAGAACGAAAACTGGTACAAGAAAGGCTGCTGCTTTACGTGGATGCAATTTTACTGTTGAAGAACCTATAAAGAAGGAAGAAACGTGTGCTGAAGATAATCCAGATTCTTCCATTGCTGAACGGTCTAAAAAGAATAAGCCTAATGAAGACACAGAGAATAACGTGGAACTTACAGAAGGGAAGGTTGATCTCTGGACACCGTTGAACTGTCTTGTTGAAGCAGCCAACAGAACCAAATCCTCCAAGTTAAATTCGCAAGGGTTGTCTCTTACCAAATTAGAGCCTCCCACTTCTCTTAATGGTGGAAGTAATATGCCTGAAGTTACAACCAAATCAGAGCCTCCTGCTACCGTCCATAATGAATTACGCATGCCTAAAACCAAAAACAAGGATAATGggcaaaaaacaaaatttggagATGACAAGGATGGAAACATCTTGCCTCCAGGACAAGTGAGGCGTAGAAGGGTTCGTCCAGCTGGTCAGAAAAGAGCAGCAGCATCTGAGATTTCTGCCTCAGCCCAAGTTATGGTAGATGCAACTAGGGACAGGTGTAACAGAAAAAACAGTCCTATTTGGTTTTCATTGGTTGCTTCAGAAGACCAGAAAGGAGATGTTCCCTTGCCTCAGATTTCAGCATGCTACTTAAGAATAAAGGATGGTACAGTGCCTGTCTCGTTCATTCAAAAATACCTTGTAAAGAAACTTAATCTTGCCAGCGAAGCAGAGGTGGAAATAATGTGCCGGGGTCGACCAGTGCTTCCATCATTGCAACTCCATAACTTAGTAGATCTGTGGTTCAGGACGGCATCAACATCTAAAAAGATACCTGCATCTGTGGGCTCCTCGGCTAAGGACTTTGTTATGGTTCTATCATATTGTCGAAAGGCCTTAGCTCCTTAA 1296 0.419 MARQVVKVKRETLQACMTCPLCHNLFNDATTISLCLHTFCKKCIYEKLSDEESDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPYKRRKIKVPEVVPSVSLPAKRKERSLSSLVITAPKVPIQTGFTGKRTKTGTRKAAALRGCNFTVEEPIKKEETCAEDNPDSSIAERSKKNKPNEDTENNVELTEGKVDLWTPLNCLVEAANRTKSSKLNSQGLSLTKLEPPTSLNGGSNMPEVTTKSEPPATVHNELRMPKTKNKDNGQKTKFGDDKDGNILPPGQVRRRRVRPAGQKRAAASEISASAQVMVDATRDRCNRKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFIQKYLVKKLNLASEAEVEIMCRGRPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKALAP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0106 431 MobiDBLite consensus disorder prediction 210 281 - -
Sto8g0106 431 MobiDBLite consensus disorder prediction 254 273 - -
Sto8g0106 431 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Sto8g0106 431 SMART ring_2 19 59 IPR001841 -
Sto8g0106 431 MobiDBLite consensus disorder prediction 157 189 - -
Sto8g0106 431 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 1 430 - -
Sto8g0106 431 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 111 IPR013083 -
Sto8g0106 431 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Sto8g0106 431 SUPERFAMILY RING/U-box 12 84 - -
Sto8g0106 431 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 430 IPR044807 GO:0004842
Sto8g0106 431 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Sto8g0106 431 Gene3D - 303 407 - -
Sto8g0106 431 MobiDBLite consensus disorder prediction 210 247 - -
Sto8g0106 431 MobiDBLite consensus disorder prediction 157 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0106 Sto-Chr8 739564 743384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0106 5 350 C3H Transcription Factor Family AT2G30580 43.802 1.57e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0106 K16277 - gmx:100783999 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3455 13 37579353 37584271 Sto8g0106 8 739564 743384 ECH
Sto8g0106 8 739564 743384 Sto8g0106 8 739564 743384 ECH