LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0103	ATGTCTCTTGATGTCTCCACCATTGATAGCGGCTTTGACAGCTTCCTTTTCTTCCACAACGGCTGCGCCAATGAGGAAGAAAATTCCAAAATTGGATTCCACAAACAGAACTATTGTCATATCACCAAAACAAAGCTTCAAATGCATCATGTCTCCTTCTTGCCTGGTTTGGTTCCTCCATCCAGGATTGCTATCTGGGTTTGTCTTGTTTGTATTTGGATCTCTGCTTTCTTGAAAGCCAATCAAGCATGGGCTGTTCCCGTAGAGCCCATATTCTTGGGTTGTGGCTTGGGTGAAGCTGGTGGTAAAGATGCTGATGGAAGGCAATGGAGGCCAGATGATAAGTACTTGTCAGAAGGTGATTCCATTGCATTCCAAGCCTCGTACCAAGACCCTTCGCTATTGTCTGAGGTTCCATACATGCGAGCTCGAGTTTTCCTATCCCAAGCAACTTATAAATTCCCCGTTGAGCCTGAAAAACGTTATTGGCTCAGGCTCCACTTTTATCCCTCTATTTACGGTACTTACAATTCAATCAATTCATATTTCTCTGTTACGGCCAATGGGGTTATGTTATTGAGCAATTTCAGCGCCGCTATTACCTGCCAAGCCCTCTCTCAAGCTTACATTGACAGAGAGTATTCCCTTGCGCCTTTGAATACAGATACTCTCACTATTACCTTCAAGCCTTCTGACAAGTACAATCAAGCTTTTGCTTTTATTAATGGTATTGAGGTGATCCAAATGCCCAATTTGTTTGATTCGACCTCATTGGTTGGGTTTTCTGGCCAAACCATAGATACCCAGATCTTGAATATTCAAACTATGTTTAGGCTAAACGTTGGTGGACAGTATATATCTCCAACACAAGACTCTGGTCTTACTCGAATGTGGTACGATGACACACCTTATTTATACGGTGCATCAACAGGTGTCACCAACGAAGCTGCCAAGAATGTCACTATCAACTACAAAACCATGCCACAATATGTTGCTCCTCCCACTATCTACTCGACCTCAAGATCTATGGGAAATGATCAAAATGTGAACATGGGATATAACCTTACATGGGTTTTCCAAGTTGATCCGAGTTTCATGTACCTGGTGAGGTTTCATTTTTGTGATTTCGTCTACTTCAAACCGAACCAGATAGTTTTCAATATCTACTTGAACAACCAAACGGCACAGGCTGGAGCAGATGTAATATTGTGGGCAGGAGGGATGGGAATGCCAACATACAAGGATTATGTGGTAATGGTGTTGGATGGGGAAAGCAATGAGCAGCTTTGGATTGCTCTGCATCCAGCGCCTGAAACAAAGCCTGAGTTCTATGATGCAATACTAAATGGGATAGAGATATTTAAGATCAATGATACAACCTTGGCTGGCCCAAATCCTCGGCCATCAGATATGCTTGCGAAAGTTCAGGAGGAGCAATCACGAACATTTAACAACAACAACgacgatgaagaagaagaactaTCCCATAAGACTGTTTTTATAAGAGGAGCTGCTGGAGGAGCAGTAGGTATTGCCTTAGTGGCAATATGCATTGTGGTGTAccaaaggaagaaaagaggtaTGAAAACAGATTCACACACATCTTGGCTTCCAATTTATGGTGGCCATTCACATAGCCAAGCAAAATCCTCACTATCAGGGAAGAGTATTGGTAGTAGCAACTTATCAGCCATGGCTCAAGGTCTATGTCGCTATTTCTCATTGCAAGAGATGAAGCAAGCTACCAAGAATTTTGATGAGTCTAATGTGATTGGGGTTGGAGGATTTGGGAAGGTGTATAAGGGTGTAATTGATAATGGGTTCAAAGTGGCTATCAAAAGGTCGAATCCGCAATCGGAGCAAGGATTTCATGAATTCCAAACGGAAATTGAGATGCTTTCCAAGTTGAGACATAAGCATTTGGTGTCCTTGATTGGGTTCTGTGAGGAGGATGGTGAGATGTGTCTGGTTTATGACCACATGGCACGTGGCACCCTGAGGGAGCATTTGTACAAGGGAAACAAACCTCTGTGTACTCTATCATGGAAGCAAAGGTTGGAGATATGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGGGCTAAGTACACCATCATTCATAGAGATGTCAAGGCAACGAACATTCTGTTAGATGAAAACTGGGTTGCCAAGGTTTCTGATTTTGGGTTATCTAAAACAGGTCCAAACATGAACAATGGGCATGTTAGTACAGTGGTAAAGGGTAGCTTCGGCTACTTGGACCCTGAATATTTTAGGAGGCAACAATTGACTGAGAAGTCTGATGTGTATTCATTTGGAGTTGTCCTATTTGAGGTCCTATGTGCAAGGCCTGTTCTGAATCCTAACCTTTCAAAGGAACAAGTAAGTCTTGCTGACTGGGCTTTGAGTTGCAAAAGAAAAGGGACTTTAGAGGATATCATTGACCCTCATCTCAAAGGAAAGATCAATCCAGAAAGTTTGAGTAAATTTGCAGACTCGGCTGAGAAGTGTTTAAGCGATCATGGGACTGATCGGCCCTCCATGAATGATCTTTTGTGGAATCTCGAATTTGCGCTCAACCTCCAAGAAAACCAAGGTTCAACTAACAATTCACTAGGTAACGAAAGTGAGTTCAAAGAAGTGAGCTTGATACAAAACGAGCATCAGAAGAGCCAAGAGTCCACTGAGAATTCCTCTCCCATCTTCTCACAGATGGTTAATCCAAAGGGGCGGTGA	2742	0.4234	MSLDVSTIDSGFDSFLFFHNGCANEEENSKIGFHKQNYCHITKTKLQMHHVSFLPGLVPPSRIAIWVCLVCIWISAFLKANQAWAVPVEPIFLGCGLGEAGGKDADGRQWRPDDKYLSEGDSIAFQASYQDPSLLSEVPYMRARVFLSQATYKFPVEPEKRYWLRLHFYPSIYGTYNSINSYFSVTANGVMLLSNFSAAITCQALSQAYIDREYSLAPLNTDTLTITFKPSDKYNQAFAFINGIEVIQMPNLFDSTSLVGFSGQTIDTQILNIQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGASTGVTNEAAKNVTINYKTMPQYVAPPTIYSTSRSMGNDQNVNMGYNLTWVFQVDPSFMYLVRFHFCDFVYFKPNQIVFNIYLNNQTAQAGADVILWAGGMGMPTYKDYVVMVLDGESNEQLWIALHPAPETKPEFYDAILNGIEIFKINDTTLAGPNPRPSDMLAKVQEEQSRTFNNNNDDEEEELSHKTVFIRGAAGGAVGIALVAICIVVYQRKKRGMKTDSHTSWLPIYGGHSHSQAKSSLSGKSIGSSNLSAMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGFHEFQTEIEMLSKLRHKHLVSLIGFCEEDGEMCLVYDHMARGTLREHLYKGNKPLCTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKATNILLDENWVAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNPNLSKEQVSLADWALSCKRKGTLEDIIDPHLKGKINPESLSKFADSAEKCLSDHGTDRPSMNDLLWNLEFALNLQENQGSTNNSLGNESEFKEVSLIQNEHQKSQESTENSSPIFSQMVNPKGR	913

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g0103	913	Pfam	Protein tyrosine and serine/threonine kinase	589	854	IPR001245	GO:0004672\|GO:0006468
	Sto8g0103	913	MobiDBLite	consensus disorder prediction	868	882	-	-
	Sto8g0103	913	Coils	Coil	473	493	-	-
	Sto8g0103	913	Gene3D	Phosphorylase Kinase; domain 1	545	660	-	-
	Sto8g0103	913	MobiDBLite	consensus disorder prediction	889	907	-	-
	Sto8g0103	913	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	88	892	-	-
	Sto8g0103	913	ProSiteProfiles	Protein kinase domain profile.	585	860	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto8g0103	913	PANTHER	OS07G0166700 PROTEIN	88	892	IPR045272	GO:0004714\|GO:0006468
	Sto8g0103	913	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	707	719	IPR008271	GO:0004672\|GO:0006468
	Sto8g0103	913	CDD	STKc_IRAK	591	858	-	-
	Sto8g0103	913	SUPERFAMILY	Protein kinase-like (PK-like)	560	860	IPR011009	-
	Sto8g0103	913	Pfam	Malectin-like domain	94	456	IPR024788	-
	Sto8g0103	913	Gene3D	Transferase(Phosphotransferase) domain 1	661	882	-	-
	Sto8g0103	913	SMART	serkin_6	585	860	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto8g0103	913	ProSitePatterns	Protein kinases ATP-binding region signature.	591	613	IPR017441	GO:0005524
	Sto8g0103	913	MobiDBLite	consensus disorder prediction	868	913	-	-
	Sto8g0103	913	Gene3D	-	271	457	-	-
	Sto8g0103	913	Gene3D	-	93	250	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0103	Sto-Chr8	723209	727302	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g0103	74	913	Receptor kinase-like Gene Family	AT3G51550	51.616	0.0	849

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Sto8g0103		Malectin_like	6.8e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0103	-		-	gmx:102659961	1237.63