Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0102 ATGGTAACCTCTGCGAAGCCCAAGCCCAATAAGTCGGCGATGTCGAAGAAGGCCAAATCCTCGCCGGCGCATCCTCCCTTTGCTGAGATGATAACGGACGCGATCGTTGCTCTGAAAGAGAGGACTGGTTCGAGCCAGTATGCTATTACCAAGTTTATCGAGGAGAAGCACAAAGATTTGCCTCCTACTTTCAGGAAGCTTTTGCTCTACTATTTGAAGAAGATGGTGGTTGCTGAAAAGCTTGTTAAGGTCAAGAACTCCTTCAAGCTCCCACCAACTCGGTCGGCTCCGGCTAAGAAGCCTGTCGACGCTAAACCTGCAAAGCCAACCACCAAGACTGCACCCAAGTCGCAGCCTAAAGCCTCTGCGAAACCCAAGGTAGCTGCTAGCCGTAAACCCctcgccaaacccaaaacaacgGCTGCAAAAAGTGCTAAAGCAACTCCAAAGCCGGCTAAGACATCAGCCAAGACCTCATTGGGGAAGAAGGTTGCGAAGGCGGCAAAGAGCATGAAGAAAGCCAAGAGTGTCAAATCACCGGTGAAAAAAGCACCTATGAAGAAGGCTAAAAAGTAG 576 0.4826 MVTSAKPKPNKSAMSKKAKSSPAHPPFAEMITDAIVALKERTGSSQYAITKFIEEKHKDLPPTFRKLLLYYLKKMVVAEKLVKVKNSFKLPPTRSAPAKKPVDAKPAKPTTKTAPKSQPKASAKPKVAASRKPLAKPKTTAAKSAKATPKPAKTSAKTSLGKKVAKAAKSMKKAKSVKSPVKKAPMKKAKK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0102 191 CDD H15 21 100 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0102 191 PANTHER HISTONE H1 9 191 - -
Sto8g0102 191 MobiDBLite consensus disorder prediction 166 191 - -
Sto8g0102 191 PRINTS Histone H5 signature 10 31 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0102 191 PRINTS Histone H5 signature 37 54 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0102 191 PRINTS Histone H5 signature 120 134 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0102 191 PRINTS Histone H5 signature 157 174 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0102 191 PRINTS Histone H5 signature 179 191 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Sto8g0102 191 Gene3D - 18 103 IPR036388 -
Sto8g0102 191 PANTHER HISTONE H1-LIKE 9 191 - -
Sto8g0102 191 SUPERFAMILY "Winged helix" DNA-binding domain 20 102 IPR036390 -
Sto8g0102 191 MobiDBLite consensus disorder prediction 1 26 - -
Sto8g0102 191 SMART h15plus2 21 87 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0102 191 Pfam linker histone H1 and H5 family 24 90 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0102 191 MobiDBLite consensus disorder prediction 1 17 - -
Sto8g0102 191 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 23 92 IPR005818 GO:0000786|GO:0003677|GO:0006334
Sto8g0102 191 MobiDBLite consensus disorder prediction 86 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0102 Sto-Chr8 720884 721541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0102 25 91 Single Myb Histone (SMH) Gene Family AT1G72740 35.821 1.12e-08 51.6