Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0083 TTGGAGCGTGAGGAGATTGGAATGTTGGGGAGTTTGATTCGTTTTCACACTCTTGTTGGTCTTTTTATCTTCCATGAGATCCCAATACCCTACGGCGGAGGCGCTGAGCTTGGAATAGAGAGGCATGCTCCGCATCGAGCTATCAAGCATGGTAACGCCGATATTGAGAATCCCCTGTGGGCGACCCGAGGGTCTTCGAATCTGCAGAGCAACGAATCGCAACTTGGATTTGCGATTTCCCGAACGCGCGGCGGGAGGGACGAGGTTGTTGATGAGGACACCCACGGTGCCGATGAGAACATCACGGAGCCATGCGGTTGCGTAGATCTCGATCATGATGGCGGAGGTTTCGGAATTGAGGAATTCTTCGTCCACACGGAAAACGAACTTCTCGTTCCATGTGGGATTGGTGTTACCGGAGAGGTCGGTTCGGGTGGTGAGACAAAGCTAAGTCAGTTGGGAGCCTTCAGGGTAATGTCTTCATCGTTTCCTGTTCTTCCCACTCATATGGAAGACAAGTATATGAAACCTCCAGATTCTTTCCAGCTATCTGCTGCCCGACATCTGAATGCAGATCCTGCCTCCATGCGGGCTGCTTCATCAAAATCCCACATTAGAAGTGGTATACACATGTTTTCAACCTCTTCTAAATGTCCTAGTGACATCCCGTTGTCCTCAGCTTCACAGCATGATAGACAGTATCAAGATTTTCCTTTCATTTCTCGGGCATTGAGAAGAGATGATACCATGCCCATGCTAGGAACTTCACTTATTCAGAGTGATGACACCATGCCCCCTAAACTTTCTTCCCATCCAGAAATACACTCTTCAACATTCATGTCTCATCCTCAGGAAAGTGATGATGTTTCCTGGGGACCAGATCCCTTTCAGGATATTCTCAGTTTTCCTGAAAATGATTCTGTCATGAATGACCAGGTGGAAAGTAGCACTTGTTATATATCTGATGACAGTATAAAGAAAACTGATTTTGGGGAGTGGGTTGATCAGTTCATGTCAGTTGATGATTCTCCGCATCCAAATTGGAATCAGCTTCTTGGTGATGATAATGTAGCAGATTCAGATTCAAATTCGAAGGAGACCCAGGCTAACAAGCAGCATGCACCATCTGGAGAAGTTAATGCTCTTCCTACTTCAGTGTCCAATGCACTACAACCTAAGCCAAGAATGCGATGGACTCCAGAGCTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAACGAGAAGGCTACTCCAAAGGGTATCTTGAACCGAATGAAAGTTCCGGGCCTTACTATCTATCATGTGAAGAGCCACCTACAGAAATATAGGACGGCCAGAGACAAACCCGAGTCACCACGAGGAACTTCTGAGAGAAAGTCGACATTAACCAAAGAATTGAAAGCTTTAGACTTGAAAGCGACTACAGACATTACTGAGGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGGTTCAAAGAAAGTTGCAGATTCAAATTGAAAAACAAGGGAAGTATCTTCAGATGATGTTTGAGAAACAGATAGAGATGGAGGATAGCAAACTCAAGACATCTTCCTCCTCCTTGGACGGGTCCACGGTGCTGCCTTCCTCTCCAACTTTGATTGACAATTCAGAAACCTTAAACGACGGTCGTGAAAAATCTGGAATGAGCAGTATGATCGCAACAACAGGTGAAGAATGTTGTGAGGATGCCAGCACAAAGCAAAAGGAAGATGAAGCTACTGATGAGCAGGAAGTGGGGGATGATCAGTTAGTTGCACCACCAGCAACCAAACGGATCTTCAAATTAGCCTCTGCTCTCATCACTGTATCAACATTTTCCTTTTCGTACTTGGATGCTCTTGTTCCTGTTGCTTTAACCACCTTCCCCAGCGTCAGATTCTCAACTGAATTTAATACTGAAGAACTATTATCAATCTCACGGGCTGGCATTGGACTATCCACTTCATTCTGGGCTGCTGAAACTTGTTTTATAGAACTAGTGGATAGAGAAAACAATGACTCTGAAGACTCTTCTGGAGCCCATGTTCCATTATCATTTAAATCAAAATCTCCACATTCCTCATCAGACCAATCTCGTCGTTCTCTTAGGTCCTTGGAGGATGACTCTTGGTTGGTATGCACATTCAAGTCAAAGTTAACCTTCCTTTTGGCAATGCAATTTGATGACCCTTCAAGTTTGGTCTTGAATAAGTTGAGGTTCTCCTTTGACGTTTCTTTCATGGTTTCCCCTAGAGCAAGATTTTCAATTGGATTAATTGCAGTCACCTGCTTTCTAGAACCAAGGGACAGAGAAAACAAGGAGTCTGAAGACTCTTCTGGAAGCGATTTTCCATTAACCTTACCCTCactctcctcttcttcttcactttttctctcttcctcCAAGTTGTCAGCAATGGCCTTGGGACCATCATTAGTCTGA 2472 0.443 LEREEIGMLGSLIRFHTLVGLFIFHEIPIPYGGGAELGIERHAPHRAIKHGNADIENPLWATRGSSNLQSNESQLGFAISRTRGGRDEVVDEDTHGADENITEPCGCVDLDHDGGGFGIEEFFVHTENELLVPCGIGVTGEVGSGGETKLSQLGAFRVMSSSFPVLPTHMEDKYMKPPDSFQLSAARHLNADPASMRAASSKSHIRSGIHMFSTSSKCPSDIPLSSASQHDRQYQDFPFISRALRRDDTMPMLGTSLIQSDDTMPPKLSSHPEIHSSTFMSHPQESDDVSWGPDPFQDILSFPENDSVMNDQVESSTCYISDDSIKKTDFGEWVDQFMSVDDSPHPNWNQLLGDDNVADSDSNSKETQANKQHAPSGEVNALPTSVSNALQPKPRMRWTPELHEAFVEAVNKLGGNEKATPKGILNRMKVPGLTIYHVKSHLQKYRTARDKPESPRGTSERKSTLTKELKALDLKATTDITEALRLQMELQKRLHEQLEVQRKLQIQIEKQGKYLQMMFEKQIEMEDSKLKTSSSSLDGSTVLPSSPTLIDNSETLNDGREKSGMSSMIATTGEECCEDASTKQKEDEATDEQEVGDDQLVAPPATKRIFKLASALITVSTFSFSYLDALVPVALTTFPSVRFSTEFNTEELLSISRAGIGLSTSFWAAETCFIELVDRENNDSEDSSGAHVPLSFKSKSPHSSSDQSRRSLRSLEDDSWLVCTFKSKLTFLLAMQFDDPSSLVLNKLRFSFDVSFMVSPRARFSIGLIAVTCFLEPRDRENKESEDSSGSDFPLTLPSLSSSSSLFLSSSKLSAMALGPSLV 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0083 823 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 390 450 IPR017930 -
Sto8g0083 823 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 160 609 IPR044848 GO:0003700
Sto8g0083 823 MobiDBLite consensus disorder prediction 683 709 - -
Sto8g0083 823 MobiDBLite consensus disorder prediction 257 285 - -
Sto8g0083 823 MobiDBLite consensus disorder prediction 257 290 - -
Sto8g0083 823 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 160 609 - -
Sto8g0083 823 Pfam MYB-CC type transfactor, LHEQLE motif 479 524 IPR025756 -
Sto8g0083 823 SUPERFAMILY Homeodomain-like 392 449 IPR009057 -
Sto8g0083 823 MobiDBLite consensus disorder prediction 530 596 - -
Sto8g0083 823 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 393 447 IPR006447 GO:0003677
Sto8g0083 823 MobiDBLite consensus disorder prediction 444 465 - -
Sto8g0083 823 MobiDBLite consensus disorder prediction 344 385 - -
Sto8g0083 823 Pfam Myb-like DNA-binding domain 395 446 IPR001005 -
Sto8g0083 823 MobiDBLite consensus disorder prediction 687 702 - -
Sto8g0083 823 Gene3D - 392 450 - -
Sto8g0083 823 MobiDBLite consensus disorder prediction 530 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0083 Sto-Chr8 560586 572681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0083 273 536 G2-like Transcription Factor Family AT3G04450 47.670 4.82e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto8g0083 Myb_DNA-binding 1.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0083 - - mtr:MTR_7g115530 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g4000 13 40791797 40796457 Sto8g0083 8 560586 572681 ECH
Sto8g0083 8 560586 572681 Sto8g0083 8 560586 572681 ECH