Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0070 ATGTGCGAAGCCCTTCAAAACAAATACCAACTGTGCGATGAGATTGGGCGTGGACGTTTCGGCACCATCTTTCGCTGCTTCGATCACATCTCCAACGAATTCTACGCCTGCAAGCTTATCCACAAGCACCTTCTCACCGATCCCACCGATCGTGCTTGCCTCCACAATGAACCCAAATACATGACTCTCTTGTCTCCCCATCCCAATATCCTTCAGATCTTCGACTTCTTTGAAACCGACGATATCTTGTCCATCGTCCTCCATCTCTGCCAACCCCTCACTCTCTTCGACCGCATCATCGACCGCCCTCTGCCGGAGACACAAGCGGCTTCCATCATCAAGCAACTCCTCGAAGCCCTTGCGCATTGTCACCGACACGGCATCGCACATCGAGACATAAAACCTGACAATATCTTGTTTGATTCCAGCGATAATCTTAAGCTTGCGGACTTCGGCTCGGCAGAGTGGTTCGGCGATGGAAGAAGCATGAGTGGGGTGGTGGGGACGCCGTACTATGTGGCGCCCGAGGTTTTGCTGGGAAGGGAATACGATGAGAAAGTGGATGTATGGAGTAGCGGAGTGATTATGTACATAATGTTGGCTGGGATTCCACCTTTTTACGGAGAATCACCAGCTGAGATCTTCGAGGCAGTGGCTAGGGCTAATCTGAGATTTCCCTCTAGGGTTTTCAGGTCGGTTTCTCCCGCTGCTAAGGATCTGCTCAGGAAGATGATTTGTAGGGATGCTTCCAGGCGATTATCTGCAGAGCAAGCCTTGAGTAAGCTAAGTGTTATGTGTACTGTAGGGCACCCATGGATCCTGAGTGGAGGAGAGACCACTGATCTGACTTGA 852 0.5094 MCEALQNKYQLCDEIGRGRFGTIFRCFDHISNEFYACKLIHKHLLTDPTDRACLHNEPKYMTLLSPHPNILQIFDFFETDDILSIVLHLCQPLTLFDRIIDRPLPETQAASIIKQLLEALAHCHRHGIAHRDIKPDNILFDSSDNLKLADFGSAEWFGDGRSMSGVVGTPYYVAPEVLLGREYDEKVDVWSSGVIMYIMLAGIPPFYGESPAEIFEAVARANLRFPSRVFRSVSPAAKDLLRKMICRDASRRLSAEQALSKLSVMCTVGHPWILSGGETTDLT 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0070 283 Pfam Protein kinase domain 9 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0070 283 Gene3D Transferase(Phosphotransferase) domain 1 94 280 - -
Sto8g0070 283 ProSiteProfiles Protein kinase domain profile. 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0070 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Sto8g0070 283 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 282 - -
Sto8g0070 283 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Sto8g0070 283 SUPERFAMILY Protein kinase-like (PK-like) 4 260 IPR011009 -
Sto8g0070 283 SMART serkin_6 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0070 283 PIRSF ILK 8 274 - -
Sto8g0070 283 CDD STKc_CAMK 8 272 - -
Sto8g0070 283 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Sto8g0070 283 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0070 Sto-Chr8 479985 480885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0070 9 281 EF-hand Containing Proteins AT1G50700 38.267 1.39e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto8g0070 Pkinase 1.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0070 - K08794 gmx:548089 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g4009 13 40862711 40863629 Sto8g0070 8 479985 480885 ECH
Sto8g0070 8 479985 480885 Sto8g0070 8 479985 480885 ECH