Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0049 ATGATTTCACATTGGTGTAAGGAGAATGGAGTGGACCTACCAAAGCCTGTTCGAGACATTGATGAAGAAGTCATAACTGATGCAGACAGGAGCCATTTAAACTCATTACTTAACAAGTTGTCAATGTCTATTTCTGATCAGAAAGAAGCTGCGAAAGAGCTTCGGCTGTTAACAAAGCGTATGCCCTTGTTTCGAATCCTTTTCAGGGAGTCCAGTGACCTAATTTTGAAGTTGCTGAGCCCATTAACACCTGGGACTGCTTCTATCCATCCTGATCTTCATGAGGACTTGATCACAACTGTTCTAAATCTCTCCATTCATGATGATAATAAGAAAATGTTTGCTGAGATCCCACTGGTTATCCCTCTGCTAATTGAGTCTTTAAAATGTGGAACCATTCAATCAAGAAGTAATGCTGCTGCGGCAATTTTCACTTTATCAGCACTTGATTCCAACAAGAGCAACATTGGAAAATCTGGAGCGATCAAACATTTGGTTGCCCTTTTAGAGGAGGGACATACATTAGCCATGAAAGATGCTGCATCTGCCATATTCAACCTATGTCTGGTGCATGAAAATAAAGGGAGGACTGTGCAAGAAGGGGCAGTGCTGGTTATCCTGAAGAAGATCATGGATGGTATTCTAGTTGATGAGTTGCTGGCTATTCTAGCACTGCTCTCAAGCCATCCCAAGGCAGTTGAAGAGATGAGTGATCTGGGTGCTGTCCCCTTGTTGCTGGATATGATAAGGAAGAGCACATCCGAACGAAGTAAGGAGAACTGTGTTGCAATTCTACATACAATCTGTTTCAACGATAGAACAAAATGGAAGGAAattagagaagaagaaaaggccAAGGGTACACTGGCGGAACTTgcgcaatgtgggacttcaaggGCCAAAAGGAAGGCCAATGGGATTCTTGAGAGGCTCAACAGATCACCCACCTTAACACACACCGCTTAG 966 0.411 MISHWCKENGVDLPKPVRDIDEEVITDADRSHLNSLLNKLSMSISDQKEAAKELRLLTKRMPLFRILFRESSDLILKLLSPLTPGTASIHPDLHEDLITTVLNLSIHDDNKKMFAEIPLVIPLLIESLKCGTIQSRSNAAAAIFTLSALDSNKSNIGKSGAIKHLVALLEEGHTLAMKDAASAIFNLCLVHENKGRTVQEGAVLVILKKIMDGILVDELLAILALLSSHPKAVEEMSDLGAVPLLLDMIRKSTSERSKENCVAILHTICFNDRTKWKEIREEEKAKGTLAELAQCGTSRAKRKANGILERLNRSPTLTHTA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0049 321 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 9 1 319 - -
Sto8g0049 321 Gene3D - 68 213 IPR011989 -
Sto8g0049 321 Pfam Armadillo/beta-catenin-like repeat 152 188 IPR000225 GO:0005515
Sto8g0049 321 SMART arm_5 149 189 IPR000225 GO:0005515
Sto8g0049 321 SMART arm_5 107 148 IPR000225 GO:0005515
Sto8g0049 321 SMART arm_5 229 270 IPR000225 GO:0005515
Sto8g0049 321 Gene3D - 214 315 IPR011989 -
Sto8g0049 321 SUPERFAMILY ARM repeat 35 311 IPR016024 -
Sto8g0049 321 PANTHER U BOX DOMAIN-CONTAINING 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0049 Sto-Chr8 365080 366045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0049 1 321 U-box Gene Family AT3G07360 58.841 8.72e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0049 - - aip:107645738 473.396