Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0047 ATGAAGGCAAGGTGTGATGGTAGCTGTAATATAAGGAGGGGTGAAGCAAACGAGAAAATGGCGATATTCACAAGGGCTGAAGCTGCGGTTCCAATACTAATAATTCAATTGCTCTACTGTTACCCACTGGTGGCAGGTCAGTCAAAGTGTGGACTAAATTTGAGTGCATCCCCGTACGTGAGATATGGAGAGTGCGGGAGTGTGAAGGAGGAATTGAGGGAATGGGAAGGGTTCCCAAACACACTGTGCTGTCGAAATGTGCTGACCACTTTGTCCCAAGCGTTGGCCCTGCAAGCCCGAGGCTCTGATGAGGGTTCTGTGTTCATTTCCCAAACAGAATGGAGCAAGTGTAGTCAACAATTTGAGTCAGAAGAAGGGGTGTCCCCCAATTCATGCGGGCTGGATAGCTTCTACTCAGGGACCACCAAATGCTCCAACGTAAGATTGCAGGATATTGAAGGACAGGAGGCGTACCAGGATGCCATGGACAAATGCGCCCACTTCGATAAACCCTTCGTTGAGGCTTGTCCACAGTGTAGCAACGCCATATTGGGTGTGACAGACACTCTGTATCAACAATTTGTTGGGAGGGAGTTTTTTGCTGTAGAAAGAGCCGTTTGCGGGGTCGCAGCACTTGTCTCTGTTTCTGCTGGAAAACCCGACGATCCTTTCATCTCCAACAAAGTCTTGACCTGTTTGCTTCCTCCACAAAACAACAAcgATGAGGTTCACCTCCATGGTTTGCTCAAATCTCCTACAGCAGTGTTGATGGTGGAGGTTGTGATAGGAGTGATGGGTGTGGCGGTGATAATAATTGTGGTGAAATACTGTGTatcaaagaagaaaggaaagaagagggTAAGATCGAAAGAGATAACAGCGTGGTCGGGAATGTACTGGTTCTCGAAAGCAGAGATAGAGAATGCGATAAAGGAGGGAGGAGTAGGAGTAGGAGTAGGAGGGAGCGAGAGGAAAGTATGGCTGGGAAGAGGGAGTGCAGGGCAGGTATACAAAGGGGTTCTCCCAAGCGGCCAAGTGGTGGCCATCAAGCATTTAACCAAAGCCAACAGCTCTGACTCCTTCACTCGCGAAGTGGAAGGCCTCTCCAGGCTTCGTCATCCCAATTTGGTTTGTCTCTTTGGCTGTTGCATGCAAGATGGACACAGATATTTAGTCTATGAGTATTGCGCTGAGGGCAATCTAGCTCAACATCTCTTGAGAAGAGATAGCCATTTGACCTGGGAAACTAGAGTTAAGATTTTAAGGGATTGCTCCTTTGCTCTCAAGTATCTCCACCACCATATAGAGGGTTGCGTTGTCCACCGAGACatcaagCTTACAAACATACTCCTGACTGAGAACCTGCAAGCAAAACTGTCGGATTTTGGACTGGCAAAGATGTTGGGGATGGAAGAGAGCAAAGTGTTTACGGATGTGAGAGGAACCATAGGGTATATGGATCCAGAGTACATGAGCAATGCCAAATTGACGTGTGCCAGTGACATTTACAGTTTTGGCATAGTTGCCTTGCAAATTCTCTCAGGCCAGAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAGCTGACTAGGAAGGCAAGAGACGTGAGCATGGGAAGGCGTCCAATCTCGGATTTTGAAGACCCAAGGCTACAGGGACAAGTGAATAAGGCGGATTTTGAAGTCATCTTACAGATTGCAGTGCTTTGTGTTGCCAAATCAAGCAAAGGTCGCCCAACCATTGAGGTTGTCTTTGAGGAATTGGATAAGGCCTATAAGAACACCCTCGCTGAATGGAAGCCTAAGCAGGATCGGAGTACATCCGGAACATCCACCTCCAAATCCTCCCATCTTCTTCCTGTTTGA 1866 0.4689 MKARCDGSCNIRRGEANEKMAIFTRAEAAVPILIIQLLYCYPLVAGQSKCGLNLSASPYVRYGECGSVKEELREWEGFPNTLCCRNVLTTLSQALALQARGSDEGSVFISQTEWSKCSQQFESEEGVSPNSCGLDSFYSGTTKCSNVRLQDIEGQEAYQDAMDKCAHFDKPFVEACPQCSNAILGVTDTLYQQFVGREFFAVERAVCGVAALVSVSAGKPDDPFISNKVLTCLLPPQNNNDEVHLHGLLKSPTAVLMVEVVIGVMGVAVIIIVVKYCVSKKKGKKRVRSKEITAWSGMYWFSKAEIENAIKEGGVGVGVGGSERKVWLGRGSAGQVYKGVLPSGQVVAIKHLTKANSSDSFTREVEGLSRLRHPNLVCLFGCCMQDGHRYLVYEYCAEGNLAQHLLRRDSHLTWETRVKILRDCSFALKYLHHHIEGCVVHRDIKLTNILLTENLQAKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGRRPISDFEDPRLQGQVNKADFEVILQIAVLCVAKSSKGRPTIEVVFEELDKAYKNTLAEWKPKQDRSTSGTSTSKSSHLLPV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0047 621 Pfam Protein kinase domain 325 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0047 621 PANTHER OS01G0253100 PROTEIN 60 602 IPR045271 GO:0004714|GO:0006468
Sto8g0047 621 SMART serkin_6 322 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0047 621 Pfam SPARK 47 190 IPR043891 -
Sto8g0047 621 MobiDBLite consensus disorder prediction 599 621 - -
Sto8g0047 621 Gene3D Transferase(Phosphotransferase) domain 1 397 615 - -
Sto8g0047 621 ProSiteProfiles Protein kinase domain profile. 322 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0047 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Sto8g0047 621 MobiDBLite consensus disorder prediction 601 621 - -
Sto8g0047 621 SUPERFAMILY Protein kinase-like (PK-like) 326 588 IPR011009 -
Sto8g0047 621 Gene3D Phosphorylase Kinase; domain 1 322 395 - -
Sto8g0047 621 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 60 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0047 Sto-Chr8 352067 354552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0047 250 594 Receptor kinase-like Gene Family AT3G58690 33.693 7.83e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sto8g0047 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0047 - - gmx:100807158 703.745