Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0046 ATGGGACCTCCGTCCTCCTTCTGCATCCAAGTAGACTGTTCGTTTCTGAGTATCGGCTTCAGTTGCAGCAATCCCGAACGAAACCTCCACTGGTTGGGGTTGATCGGCGAGAGTAAGAAAGAGGTGCTTCTTGGAGGGGAAAGAAGGGGGAGGGGAGGAAGATCGGGAAAGAATGGAGAGGTAATCGGGAGGGAGGAAGGTTTCCCAAAGGGCGTCGGATTGGGCGGCGGAGCGGAAGGTAGAAGAAACCAAGGAGAGTCGGCAGGCGTCACGAGGAGAGGTGAAGGAAAGGACGGTGGCGATGCAAGCTTCAGGCAGATCAGCCAAGGCCATAGTAAAAGTAAGAAAAACATAAATGGGGAGGAGAATGAATCTGGAGCACAGGAACAAGTGGCTTCAAAAGCACCGGATGAGGGAAACCAAGGTAACAACGTAAATATTGAAGCGCAAAGCTTCACTTTCCGTGAGCTAGCAACTGCAACCAAGAATTTCCGTCAGGAATGCCTATTGGGAGAAGGTGGGTTTGGCAGAGTATACAAGGGCACCATTCCGGCAACTGGAAAGgtgGTGGCGGTGAAGCAACTTGACCGGAGTGGGATGCAAGGGAGTAAGGAATTCCTAACAGAGATAGGGGTTCTAAGTCAACTGAAGCATGAAAATCTGGTGAATCTGGTTGGTTATTGCGCGGATGGGGATCAACGTCTTTTGGTGTACGAGTACATGTCAGGGGGTTCTGTAGACAGCCGTCTTTTTGAGGGTGCAGGGAAGGGTGGTCAAATGGATTGGTTCACGAGAATGAAGATAGCATCGGGTGCAGCCAAAGgacttgagtacttgcatgaCAAGGCCAATCCCCCAGTTGTGTACCGAGACTTGAAATCCTCCAACATCTTGCTCGATGATCATCTTAATCCCAAACTCTCTGATTTTGGATTGGCCAAGCTTTCCGGTGGAGATAAGTCCAACCTTATTACTCCTGGAGTTACCGGTACCTACGGTTACTCTGCTCCTGAGTACACCAGAACAGGCCAACTCACCTTGAAATCAGATGTCTACGGTTTTGGAGTTGTCATGCTAGAGCTCATTTCTGGACGACGACCCATTGATACTACCAGGCCAAACGAGGAGCAAAACCTTGTTTCATGGgcacaaCCCTTATTCAGAAATCCAAAGCGCTTCCCGGAAATGGCAGATCCCGTTTTGAACAACAATTTCCCAGAAAAGGATCTGAATCAAGCAGTGGCCATAGCAGCCATGTGCCTGCAAGAGGAGGAAGGGGCGCGTCCTCTAATGAGTGACGTGGTGACTGCTCTCAGTTTCCTGTCTGTGGTTCCACCGGAGGTTATACCGGCAGCTGTGTCGCCGGCCACGGGGCCCCCGGAGGAGGGTGGTAGCAGtgaaagtgaagaagaagaagaagaagaagaagaagaagaagaagattataGTTCGGAGGAGTGTTCGGAAAGCGACGAGAAAGGAGAGGAGTACtactcaaaatcaaaatcaaaatcaaaatcaaaattaaaatcaagcTGCAGGAAAAGCAGTAAGAAAGCGCTTAGTTTATTGCGGAAGAAAAGCAGTTCGAGTTCGAGTTCGAGGAAAGATCAGTTAAAGCAGAAGAGCAGTAAGAAGACAGCGTCGTCATCGGGGAGCAAGAGCAAGAGCAGAAAAGCATCATTAAGTCGGAAGTCAAGCGCCACATCGGAGGATGCAAGTGGTGGGAGCAGCAGCAGGATATCGCTCTCATACTCACAAGGTGACATCTCATTTGGGCTGATTAGTAGTGGGAGTGGTGATAGTACAGTTCACTCTACTGAAGCCAATGGTAGTGGCAGTGGGATGCCGCGTTTGCCCCACGCtcatacctctaaacaacccccAAAAGATCACAGGAGGGACGCACTCGCCGCTTCTAGCGCTAAAGTATaa 1935 0.4713 MGPPSSFCIQVDCSFLSIGFSCSNPERNLHWLGLIGESKKEVLLGGERRGRGGRSGKNGEVIGREEGFPKGVGLGGGAEGRRNQGESAGVTRRGEGKDGGDASFRQISQGHSKSKKNINGEENESGAQEQVASKAPDEGNQGNNVNIEAQSFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVAVKQLDRSGMQGSKEFLTEIGVLSQLKHENLVNLVGYCADGDQRLLVYEYMSGGSVDSRLFEGAGKGGQMDWFTRMKIASGAAKGLEYLHDKANPPVVYRDLKSSNILLDDHLNPKLSDFGLAKLSGGDKSNLITPGVTGTYGYSAPEYTRTGQLTLKSDVYGFGVVMLELISGRRPIDTTRPNEEQNLVSWAQPLFRNPKRFPEMADPVLNNNFPEKDLNQAVAIAAMCLQEEEGARPLMSDVVTALSFLSVVPPEVIPAAVSPATGPPEEGGSSESEEEEEEEEEEEEDYSSEECSESDEKGEEYYSKSKSKSKSKLKSSCRKSSKKALSLLRKKSSSSSSSRKDQLKQKSSKKTASSSGSKSKSRKASLSRKSSATSEDASGGSSSRISLSYSQGDISFGLISSGSGDSTVHSTEANGSGSGMPRLPHAHTSKQPPKDHRRDALAASSAKV 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0046 644 MobiDBLite consensus disorder prediction 46 64 - -
Sto8g0046 644 ProSiteProfiles Protein kinase domain profile. 164 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0046 644 MobiDBLite consensus disorder prediction 504 522 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 624 644 - -
Sto8g0046 644 ProSitePatterns Protein kinases ATP-binding region signature. 170 193 IPR017441 GO:0005524
Sto8g0046 644 PANTHER OS07G0668900 PROTEIN 114 531 - -
Sto8g0046 644 CDD STKc_IRAK 170 438 - -
Sto8g0046 644 Gene3D Phosphorylase Kinase; domain 1 125 240 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 594 644 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 46 145 - -
Sto8g0046 644 PANTHER RECEPTOR-LIKE KINASE LIP1 114 531 - -
Sto8g0046 644 Pfam Protein kinase domain 166 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0046 644 SMART serkin_6 164 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0046 644 MobiDBLite consensus disorder prediction 544 582 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 464 492 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 451 582 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 123 145 - -
Sto8g0046 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Sto8g0046 644 Coils Coil 465 488 - -
Sto8g0046 644 Gene3D Transferase(Phosphotransferase) domain 1 241 444 - -
Sto8g0046 644 MobiDBLite consensus disorder prediction 594 613 - -
Sto8g0046 644 SUPERFAMILY Protein kinase-like (PK-like) 146 443 IPR011009 -
Sto8g0046 644 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0046 Sto-Chr8 347262 350918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0046 100 478 Glycoside Hydrolase AT3G07070 60.526 1.38e-156 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto8g0046 Pkinase 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0046 - - gmx:100790911 484.952