Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0040 AtgggagaggaggaggaggtgcaTAAGCATAATGGGAAACGGAGCATCGCAGAGAGAAGGGGATTCTGTTGGATTTCAGGCTCAATGGATTCTGCCTCTGCCTGCCTTACTATACCCCCCGGCATTAGCCCCACCGCCTTGCTTCACTCTCCTCCTATTATGCTTCCTAATTCTCAGGTTTCTAATCATTGCATCATGGCGAAGGGGGGAATTGCAGACTGCCAGCCATTTGTGCCTGTTCAACCAAAAGCAAATGCAACAAAAACTGAAATCCATTCATACAATGATGTGCAAATGATACAAAAGCGTGGTTCTGAGGAAGCTAGAGAAGAAAGCCCTGTGTCTAACAAGGATACTGGAGGAGACAAGAGAGAGATTAACCATTCAATGGGAATGGCAAGGAACTCAGAAGATGGGTACAATTGGAGGAAATATGGACAGAAGCAGGTCAAGAAAAAGGTGGAACGATCCCTTGATGGCCAAGTAACCGAAATTATCTACAAGGAGGATGCTCCACAGCTTTCTTCTACACTTGCTAGTCAaggtgatgatgaagatggagcATCACTTGAAGGGGATGCAGAGGATGAAGAATCTGAGTCAAAAAGAAgGAAGAAAGAGATTGAATCAAATTTTGCCTCTAGAGCTGTCCGTGAGCCAAGGGTAGTAGTCCAAATTGAGAGTGAAGTGGACATACTTGATGATGGTTATCGTTGGCGAAAGTATGGACAGAAAGTTGTGAAAGGAAATCCAAACCCCAGGAGCTACTACAAATGCACAAGTGCTGGGTGTTTAGTAAGGAAACATGTGGAAAGGGCTTCACACGATCTAAAATTTGTAATTACTACTTATGAGGGAAAACATAACCATGAAGTGCCCACCGCTAGAAGCACAAGTGTAGTTCCAAATGCTGCTGCTGCTAATGCACAAGTGACTCTTCCGTTACCTGGAAATGTGAATAATATTCCTAAGCCAGAAACTCAAGTCCAAAACCTTGTACCTCATTTTGATACAAAACCTGAGTTTCTAAGGCCTGCTTTCGTTGGTGATGATATGAAATATGGGTCTTCCTCCATATGCCAAACCAAGTATTCTGCCATGCCTTACAGCTCCTATGATAATGAACTCAATCCTGACCCTTGTGCTGCTTCAGTCTTCCCCGACTTCCCATCACTACACATGAATCTTACTTCGTCTGCAAAATATCCTCTGCTTGGATATAACCTCAACTTGTTAAAACCGATGCCTCCAATCCAGTCCTTCCTTTCAGGGCAGCAGCTGAAAGAGGTAGATACAGGTTTCGTGAGGCCTAAACAGGAGCAgaaggataatattttatatgatacaAGCATGCACATTAATATTGTTGATCATCCAAGTTCATCCTCACTTTACCACCGCCTCATGCAAAATTTTCCTTCATAA 1425 0.414 MGEEEEVHKHNGKRSIAERRGFCWISGSMDSASACLTIPPGISPTALLHSPPIMLPNSQVSNHCIMAKGGIADCQPFVPVQPKANATKTEIHSYNDVQMIQKRGSEEAREESPVSNKDTGGDKREINHSMGMARNSEDGYNWRKYGQKQVKKKVERSLDGQVTEIIYKEDAPQLSSTLASQGDDEDGASLEGDAEDEESESKRRKKEIESNFASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASHDLKFVITTYEGKHNHEVPTARSTSVVPNAAAANAQVTLPLPGNVNNIPKPETQVQNLVPHFDTKPEFLRPAFVGDDMKYGSSSICQTKYSAMPYSSYDNELNPDPCAASVFPDFPSLHMNLTSSAKYPLLGYNLNLLKPMPPIQSFLSGQQLKEVDTGFVRPKQEQKDNILYDTSMHINIVDHPSSSSLYHRLMQNFPS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0040 474 MobiDBLite consensus disorder prediction 102 140 - -
Sto8g0040 474 SUPERFAMILY WRKY DNA-binding domain 226 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 169 446 IPR044810 GO:0003700
Sto8g0040 474 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 60 IPR044810 GO:0003700
Sto8g0040 474 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 168 IPR044810 GO:0003700
Sto8g0040 474 MobiDBLite consensus disorder prediction 196 210 - -
Sto8g0040 474 Gene3D WRKY domain 127 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 Gene3D WRKY domain 220 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 SMART WRKY_cls 136 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 SMART WRKY_cls 233 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 Pfam WRKY DNA -binding domain 234 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 SUPERFAMILY WRKY DNA-binding domain 135 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 ProSiteProfiles WRKY domain profile. 228 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto8g0040 474 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 169 446 - -
Sto8g0040 474 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 23 60 - -
Sto8g0040 474 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 101 168 - -
Sto8g0040 474 MobiDBLite consensus disorder prediction 173 210 - -
Sto8g0040 474 MobiDBLite consensus disorder prediction 102 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0040 Sto-Chr8 320072 322781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0040 99 305 WRKY Transcription Factor Family AT2G38470 40.972 3.19e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto8g0040 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0040 K18835 - gmx:100800211 353.214