Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0039 ATGGATGAGGAAGGAGATCAGCGCATCCTGCTTCCCCCGCTCAATTTCTCAACGGTTGAGGACAACATTTTTCGATCCAGCTTCCCTCGACCTTCCAATTTTCCCttcctccaaaccctaaatctccgCACTATCATATACTTGTGTCCCGAACCGTATCCGCTAGAAAATTTGGAGTTTCTTCGCTCACAGGATATTCGGCTCTTTCAGTTTGGAATTGAAGGAAAGACGGAACTTTCTGTACCTTTTGTCAAGAATACTATCATGGAGGCCTTGAAAATCTTAATTGATGTGAGAAATCACCCAGTTTTGATTCATTGCAACCAAGGAAAGCACCGAACAGGTTGCCTCGTTGGTTGCTTGAGAAAATTGCAGAAGTGGTGTTTGTCTTCTGTGTTTGAGGAGTACAAGAGATTTGCTGGTGCTAAATCCAGGATAGCGGATTTAAGATTTATAGAATCATTTGACATCTTATGCCTGAGGCAATGCCTTTACAGCATCCTATACCAGTACCACGGATATAATTCAAGGAAGAGGCGGTTGTTGTATACAGAAGAGAATATACAGAAGCCCCGAATGACGTCAGTTTAG 591 0.4112 MDEEGDQRILLPPLNFSTVEDNIFRSSFPRPSNFPFLQTLNLRTIIYLCPEPYPLENLEFLRSQDIRLFQFGIEGKTELSVPFVKNTIMEALKILIDVRNHPVLIHCNQGKHRTGCLVGCLRKLQKWCLSSVFEEYKRFAGAKSRIADLRFIESFDILCLRQCLYSILYQYHGYNSRKRRLLYTEENIQKPRMTSV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0039 196 ProSitePatterns Tyrosine specific protein phosphatases active site. 105 115 IPR016130 GO:0016311|GO:0016791
Sto8g0039 196 ProSiteProfiles Dual specificity protein phosphatase domain profile. 15 170 IPR020422 GO:0006470|GO:0008138
Sto8g0039 196 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 6 179 - -
Sto8g0039 196 Pfam Tyrosine phosphatase family 10 157 IPR004861 -
Sto8g0039 196 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 11 156 IPR029021 -
Sto8g0039 196 Gene3D Protein tyrosine phosphatase superfamily 9 158 IPR029021 -
Sto8g0039 196 PRINTS Plant and fungal dual specificity phosphatase signature 10 27 IPR020428 GO:0016791
Sto8g0039 196 PRINTS Plant and fungal dual specificity phosphatase signature 47 60 IPR020428 GO:0016791
Sto8g0039 196 PRINTS Plant and fungal dual specificity phosphatase signature 66 80 IPR020428 GO:0016791
Sto8g0039 196 PRINTS Plant and fungal dual specificity phosphatase signature 83 97 IPR020428 GO:0016791
Sto8g0039 196 PANTHER TYROSINE-PROTEIN PHOSPHATASE 6 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0039 Sto-Chr8 317117 318560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0039 2 192 Protein tyrosine phosphatase (PTP) family AT3G02800 66.492 2.49e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0039 K18045 - jre:108982966 317.775