Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0032 ATGTTCAAATTCTTGAAAGAGGTGGTGGGTGGATCTGGAACCGGACTTAAAGATCTCCCATACAATATCGGCCAACCATATCCTTCTGCTTGGGGATCTTGGACTCACTACCGTGGTACCACCAAGGATGATGGATCTGCAGTTTCAATCTTTTCTCTGTCTGGGAGTAATGCTCAGGATGGACATTTAGCAGCTGGCCGTAATGGTGTCAAGCGTCTCCGGACAGTGAGGCATCCaaatattttatcatttctTCACAGTACCGAGACTGAAACTTCTGATGGTGGTTCTGCCAAGGTTACCATCTATATTGTTACAGAGCCTGTCATGCCACTTTCAGAAAAGATTAAGGAGTTAGGATTAGAAGGTACACAAAGGGATGAATATTATGCTTGGGGGCTGCATCAAATTGCCAAGGCTGTGAGCTTTTTAAACAATGATTGTAAACTTGTTCATGGTAACGTTTGCTTAGCTAGTGTTGTGGTCACACAAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAATTTGATGGGAGCAATGAGGCTTCCTCTGGGCAAATGCTGCAATATGCATGGCTTGTTGGATCACAGTACAAACCAATGGAGTTGGCAAAATCTGACTGGACTGCAATCAGAAAGTCTCCTCCATGGGCTATTGATTCTTGGGGCATGGGTTGTCTTATATACGAGCTATTTTCGGGTGTGAGTTTGGGCAAAACAGAGGAGTTACGCAACACTGCATCCATTCCCAAGTCTCTACTTCCAGATTACCAGCGGCTATTGAGTTCCATGCCTTCTCGTAGATTAAATACGTCAAAGCTTATAGAAAACAGTGAATATTTTCAAAACAAGTTGGTAGACACAATACATTTCATGGAAATTCTTAGTTTGAAAGACAGTGTTGAGAAAGATACATTCTTCCGCAAGCTTCCAAATCTAGCAGAGCAACTTCCTCGACAGATTGTGTTGAAGAAGTTACTACCTTTATTAGCTTCCGCTCTTGAATTTGGTTCAGCTGCTGCCCCTGCTCTGACGGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTCAGTATCAAGGTTCTTCCAACTCTTGTAAAACTTTTTGCCTCCAATGACCGAGCTATTCGAGTTGCCCTTCTTCAACATATTGATCAATTTGGAGAGTCATTATCAGCGCAGGTCGTTGATGAGCAGGTTTATCCTCATGTTGCTACTGGGTTCTCTGACACATCTGCTTTTCTGAGGGAACTGACTCTTAAGGCCATGCTTATATTGGCACCAAAGCTGTCTCAGAGGACTATCTCAGGGTCATTATTGAAGTATCTGTCCAAGTTGCAGGTTGATGAGGAACCGGCAATTCGAACAAATACTACCATTTTACTAGGAAATATTGCAAGCTACTTAAATGATGGGACAAGAAAAAGAGTTCTGATTAATGCATTTACTGTCCGTGCATTACGTGATACTTTTCCCCCTGCCAGAGGAGCAGGCATTATGGCATTATGTGCCACTGGCTCTTATTATGATATACCTGAAATTGCAACACGGATTCTTCCTAATGTTGTTGTACTTACAATTGATCCTGACAGTGATGTTCGATCCAAGGCATTCCAAGCTGTTGATCAATTTTTGCAGATGGTGAAGCAGTGTTATGAAAAGACAAATACGGCAGATACCACAGGTTCTGTGGTGGGAATCTCATCAGTTCCAGGAAATGCTAGTTTGCTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGTAAACCTTCTGATCATGCTCCAGTTGCTTCTGTAAGTTCCAGCACACCTATTCCAACGCCTTCCAATGCCAGTTCAGCTTTGGATACTCCATCAACTGCACCTGTTCGAGTAAGGTCTACCTCAGACTTGGCTGAAATTTCTGTCCCTGCATCTCCAACATCAACAGATGGCTGGGGAGAACTGGAGAATGGAATTCATGAAGAGCATGAGAGTGACAAGGATGGTTGGGATGATTTGGAACCACTTGAAGAGTCAAAACCATCCTCAGTTCTAGCAAACATTCAAGCAGCTCAACGGCGGCCGGTTTCTCAACATGTTTCACAGACAAAACAAGCGTCAAGTTTGCGACCAAAAAGTGTAACAAAGTTGAGCAAGGATGAGGATGATGATTTGTGGGGTTCCATAGCAGCTCCTGCTCCGAAAACATCAAAATCATTAGATCTCAAATCAACTGCTGCTGATGAGGATGATCCCTGGGCTGCTATTGCTGCCCCGGCACCCACTACTAAAGCCAAGCCCTTATTGGCTAGCAGAGGTCGGGGAGCTAAACCTGCTGCTCCAAAATTAGGTGCACAGAGGATCAACCGGACATCATCTGGGATGTAG 2385 0.4394 MFKFLKEVVGGSGTGLKDLPYNIGQPYPSAWGSWTHYRGTTKDDGSAVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTETETSDGGSAKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNEASSGQMLQYAWLVGSQYKPMELAKSDWTAIRKSPPWAIDSWGMGCLIYELFSGVSLGKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFSIKVLPTLVKLFASNDRAIRVALLQHIDQFGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKAMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNDGTRKRVLINAFTVRALRDTFPPARGAGIMALCATGSYYDIPEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLQMVKQCYEKTNTADTTGSVVGISSVPGNASLLGWAMSSLTLKGKPSDHAPVASVSSSTPIPTPSNASSALDTPSTAPVRVRSTSDLAEISVPASPTSTDGWGELENGIHEEHESDKDGWDDLEPLEESKPSSVLANIQAAQRRPVSQHVSQTKQASSLRPKSVTKLSKDEDDDLWGSIAAPAPKTSKSLDLKSTAADEDDPWAAIAAPAPTTKAKPLLASRGRGAKPAAPKLGAQRINRTSSGM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0032 794 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 792 - -
Sto8g0032 794 MobiDBLite consensus disorder prediction 654 677 - -
Sto8g0032 794 MobiDBLite consensus disorder prediction 600 651 - -
Sto8g0032 794 SUPERFAMILY ARM repeat 293 554 IPR016024 -
Sto8g0032 794 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Sto8g0032 794 Gene3D Transferase(Phosphotransferase) domain 1 109 280 - -
Sto8g0032 794 Gene3D - 282 560 IPR011989 -
Sto8g0032 794 SMART serkin_6 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0032 794 MobiDBLite consensus disorder prediction 681 712 - -
Sto8g0032 794 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Sto8g0032 794 MobiDBLite consensus disorder prediction 595 794 - -
Sto8g0032 794 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0032 794 SUPERFAMILY Protein kinase-like (PK-like) 35 287 IPR011009 -
Sto8g0032 794 Pfam Protein kinase domain 37 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0032 794 PANTHER - 1 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0032 Sto-Chr8 269330 283174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0032 70 291 MAP Kinase Kinase Kinase AT5G66850 23.729 3.26e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Sto8g0032 Pkinase 8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0032 K08876 - gmx:100782748 1328.92