Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2562 ATGTGTGTTGAGAGGGAGCTTTCACTAGAAGTTACCAAGAGCAGGCCATTTCACTCTGGAAAGAACCTTCCTCAGCTCTCCCACCGTCCCTGCCTCATTGACGGCTCCACCGGCAAAATCTACACCTACGCCCAAACCCACCTCCTTTCCCGCAAGGTCGCCGCTGGTTTCTCCAAACTCGGCATCACCAAAGGCGACGTCATCATGATCCTCCTCCAGAATTCCCCCGAGttcgtcttctccttcttcgCCGCCTCCATCATCGGCGCCGTCGCCACCACCGCCAACCCCTTCTACACCCCCGCCGAGCTCCGCAAGCAATTAACCGCCTCCAAGGCCAAACTCATCATCACGCAGTCAATGTACGTTTCCAAGCTCCAGGTGGAGGCCGCCGACGAGGACGAATTCCAGGTGATCACGGTGGACGATCCGCCGGAGAAATGCCTGCATTTCTCGGTGGTATCGGAAGCGGACGAGAGGGAAGTTCCGGAGGTGGAGATTGAAGCGGAGGATGCGGTGGCGCTGCCGTTCTCGTCGGGGACGACGGGGTTGCCGAAGGGAGTGGTACTGACGCACAAGAGCTTAACGACGAGCGTGGGACAACAGGTGGACGGAGAGAATCCGAATCTGTACCTGAAGGAAGAGGACGTTCTGTTATGCGTGCTTCCTCTGTTTCACATATTCTCGTTGAACAGTGTGTTGCTGTGCGCGCTGAGAGCGGGGAGTGCGGTGCTGCTCATGCACAAGTTCGAGATAGGGGCGTTGCTGGAGTTGATACAGAGGCACAAGGTGTCGGTCGCCATGGTGGTGCCTCCGCTCGTGCTGGCCTTGGCCAAGAATCCCACCGTCGCCGAATTCGACCTCAGCTCCATCAGGTTGGTCCTGTCTGGAGCCGCGCCGCTTGGGAAGGAGCTGGAGGAGGCGCTTAAGACACGCGTGCCTCAGGCAGTTTTGGGACAGGGATATGGAATGACAGAGGCAGGGCCGGTGCTATCGATGTGCTTGGGTTTTGCGAAAGAGCCATTGCCAACAAAGTCAGGCTCTTGCGGCACTGTTGTCCGAAACGCACAGCTGAAAGTGGTTGACCCTCAAACAGGCGCCTCTCTTGGCTACAACCAGCCTGGTGAGATTTGCATCCGAGGccaacaaatcatgaaagGATACCTGAATGATGACAAGGCCACAGAAGCAACTATTGATGCAGAGGGTTATCTTCATACCGGTGATATTGGCTACATAGATGACGACGATGAGATTTTCATAGTTGACAGGGTTAAGGAACTCATCAAATTCAAAGGCTTTCAGGTGCCACCCGCAGAACTGGAAGGCCTTCTTGTGAGCCACCCTTCCATTGCTGATGCAGCTGTTGTCCCGTCCAATGGCTTTGATCTTACTGAGGAGGCTGTAAAGGAATTCATCGCTAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTACTTTGTTCATGCAATTCCAAAGTCTGCAGCTGGAAAGATATTAAGAAAAGATCTCAGAGCACAGCTAGAGAGCGCCACCCAAAAGCCTTGA 1551 0.5319 MCVERELSLEVTKSRPFHSGKNLPQLSHRPCLIDGSTGKIYTYAQTHLLSRKVAAGFSKLGITKGDVIMILLQNSPEFVFSFFAASIIGAVATTANPFYTPAELRKQLTASKAKLIITQSMYVSKLQVEAADEDEFQVITVDDPPEKCLHFSVVSEADEREVPEVEIEAEDAVALPFSSGTTGLPKGVVLTHKSLTTSVGQQVDGENPNLYLKEEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGALLELIQRHKVSVAMVVPPLVLALAKNPTVAEFDLSSIRLVLSGAAPLGKELEEALKTRVPQAVLGQGYGMTEAGPVLSMCLGFAKEPLPTKSGSCGTVVRNAQLKVVDPQTGASLGYNQPGEICIRGQQIMKGYLNDDKATEATIDAEGYLHTGDIGYIDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSAAGKILRKDLRAQLESATQKP 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2562 516 Gene3D - 459 514 IPR045851 -
Sto7g2562 516 PANTHER 4-COUMARATE--COA LIGASE 3 21 507 - -
Sto7g2562 516 SUPERFAMILY Acetyl-CoA synthetase-like 26 511 - -
Sto7g2562 516 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 507 - -
Sto7g2562 516 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Sto7g2562 516 Pfam AMP-binding enzyme 28 431 IPR000873 -
Sto7g2562 516 Gene3D - 426 458 IPR045851 -
Sto7g2562 516 CDD 4CL 22 505 - -
Sto7g2562 516 Gene3D - 6 425 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2562 Sto-Chr7 30853196 30862467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2562 9 438 Monolignol Biosynthesis Gene Families AT1G65060 70.345 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2562 K01904 - gmx:547492 768.459