Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2561 ATGGAAATTCTCCGTCTCAACCACCTCGCTCAGCATTTCTCTTGGACGAGAGTGTACACCACCAACAGGACCCAACTTCCTCATCCTGCTAAACTTTTCTTTTGCCAGGCAAAACAAGATGGGTCATTAGACTTAAAGTTGATGGCTCCAACTCTGTTAGCAGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCTTGTTTTTGAAGAAACAAGGTTTGAGCAATGCAATTGCTGCAAGAACCATCAACAAGTCAGACGACTTTATTGATCACCTTGTCTCAAGACTTCATTCAAAACATAAATCTCGGTATCTAGTAGGAAGAGAACTTACAACTCTTGAGATTAGGGATGCTCTAATTCCTTACCTGGAAACCCTTTTTGAAGAGCATGGAAACATCTTGATAGATGTGGTTGAAAACTATCCAAACCCTCCTATGAAGGAAAAAGCTGCAGCACCAATATCTATCCCTAGTCCTTTGATGGAATCTAAGAAGATGAAAGCCATGTCTCGAGTGAGTGAGATAGACCCGGCCGGCAAGCTTCGCCCTCATATTGTCTATCTCTTGGAGCTTGGCATGGACATTGAGCAGATCAAGAGTATCACAAGAAGATTTCCATCCTTTGCCTACTATAGCTTGGAGGGGAAAATTAAGCCAGTGGTTGagtttcttctagaacttggaGTGTCAAAAGAAGACATCCCCATCATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGTCTCTCTGAAAATCTTAAACCCACCATGAAATTCTTGGAAACTCTTGGTGTGGACAAGCAGCAATGGGCAAAGGTGATATATAGATTTCCAGCTCTTCTAACTTACAGCAGGCAGAAGGTGAAAGCAAGTATAGATTTTCTCTATGAAATAGGGCTCTCAGAGGAGAACATAGGGAAGATTTTAACTCGCTTCCCCAGTATAATTAGTTACAGTGTAGAGGACAAGCTTCGACCCACGGCTAATTACTTTCGTTCGTTGGGAGTGGATGTGGGCATTCTTCTATTTCGATGTCCCCAGAATTTCGGTCTCAGCATTGATGCTAATCTGAAGCCTGTGACAGAGTTTTTCTTGGAGAGGGGATACACATTAGAGGAAGTTGGTACCATGATTTCAAGATATGGAGCATTGTATACTTTTAGCTTGGTAGATAATTTGATTCCAAAGTGGGAATTCTTTCTGACCATGGATTACCCCAAATCAGAGTTGGTTAAATTCCCTCAGTTTTTTGGTTACAGTTTAGAAGAGAGGATCAAACCAAGATATGCTCGTGTGAAAGAATCCAGAGTGAGGTTGCTGCTAAACCAGGTTCTTTCACTATCAAGTAGTGACTTTGAGAAGGccttgaaaaagaaaatcaagaaaatggAGCTTGATGGGGATTCTAGTTGTAGTACTAAAGATGTTGGAACAGGAAAGAAGGGAAAATGA 1452 0.4036 MEILRLNHLAQHFSWTRVYTTNRTQLPHPAKLFFCQAKQDGSLDLKLMAPTLLAAEKEEAKAVLTLFLKKQGLSNAIAARTINKSDDFIDHLVSRLHSKHKSRYLVGRELTTLEIRDALIPYLETLFEEHGNILIDVVENYPNPPMKEKAAAPISIPSPLMESKKMKAMSRVSEIDPAGKLRPHIVYLLELGMDIEQIKSITRRFPSFAYYSLEGKIKPVVEFLLELGVSKEDIPIILTKRPQLCGISLSENLKPTMKFLETLGVDKQQWAKVIYRFPALLTYSRQKVKASIDFLYEIGLSEENIGKILTRFPSIISYSVEDKLRPTANYFRSLGVDVGILLFRCPQNFGLSIDANLKPVTEFFLERGYTLEEVGTMISRYGALYTFSLVDNLIPKWEFFLTMDYPKSELVKFPQFFGYSLEERIKPRYARVKESRVRLLLNQVLSLSSSDFEKALKKKIKKMELDGDSSCSTKDVGTGKKGK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2561 483 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 22 465 - -
Sto7g2561 483 Gene3D Transcription termination factor 3, mitochondrial 237 462 IPR038538 -
Sto7g2561 483 Pfam mTERF 292 453 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 Pfam mTERF 49 296 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 PANTHER CGI-12 PROTEIN-RELATED 22 465 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 375 406 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 271 301 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 339 370 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 235 266 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 306 337 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Sto7g2561 483 SMART mt_12 407 438 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2561 Sto-Chr7 30849643 30851890 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto7g2561 mTERF 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2561 K15032 K12177 gmx:100781900 704.131