Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2557 ATGATGATGGGTGATGATGAAAGTAGTAGTAGCAGTGGGTTGAAGAAGGGAGCGTGGACGGCAGAAGAGGACAGAGTGCTTGTGGATTACATAGAAAAGAATGGACATGGAAGCTGGAGAGCAGTTCCAAAGCTAGCTGGTCATCTACCAGGCAGAACTGACAACGAGATCAAGAACTTATGGAACACACATTTGAAGAAGAAGCTTTTGGAGATGGGATTAGATCCTCTCACTCACCGCCCTCGCACACACCACCATCTTCATCTACTCAATATTCTCCTGCAACACTACTTGCTAGCCGCTGCTAATGCTAATAATAATATCCATCCTCCTATTATTAATAGTAATAGCAACGCTCTAAGTCTAGCGTTGCAACACCAGCACTTCAACACTCTCCTTCAGGATCAGGATCAGGCCCTAATTAACTTAGACTTGGAGGCACACCTCAACCTCATCATCATGATGatcatcaataatattaattctcCCTCTACCTCCCAAACTCTTCATTTTGCTAATTCTCATCCTCAATTAAACAACCACCACCATCCTCCACCTTCCAATGATTTTACAAACTTCCAACCCCCATTATTCATTCATCACCAACAATTACCAATGccatattataataattataataattatattaatcctCCACCGCCTAATTCAAGTAATTCGCTTCCAAATCTGGTTCATGAAGAATGCTCTCCACCATCACTCAAGAAGATGAAGACCACCATGTTCAACCCAACTGATGATCAtatcaatatcaataatattaatccttCTTCTGCTGCTTCCACTCATTCAACAACCTTTGAAATGTGGGGAGATTTCATGCCTCATGACGCTCACCAATCAACCCCTGCTTATTGGAAACATCTCTTAGACTTAGACATACAGTAA 906 0.3962 MMMGDDESSSSSGLKKGAWTAEEDRVLVDYIEKNGHGSWRAVPKLAGHLPGRTDNEIKNLWNTHLKKKLLEMGLDPLTHRPRTHHHLHLLNILLQHYLLAAANANNNIHPPIINSNSNALSLALQHQHFNTLLQDQDQALINLDLEAHLNLIIMMIINNINSPSTSQTLHFANSHPQLNNHHHPPPSNDFTNFQPPLFIHHQQLPMPYYNNYNNYINPPPPNSSNSLPNLVHEECSPPSLKKMKTTMFNPTDDHININNINPSSAASTHSTTFEMWGDFMPHDAHQSTPAYWKHLLDLDIQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2557 301 ProSiteProfiles Myb-like domain profile. 11 65 IPR001005 -
Sto7g2557 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 47 - -
Sto7g2557 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 46 297 - -
Sto7g2557 301 CDD SANT 18 65 IPR001005 -
Sto7g2557 301 SMART sant 15 67 IPR001005 -
Sto7g2557 301 Gene3D - 13 70 - -
Sto7g2557 301 Pfam Myb-like DNA-binding domain 16 65 IPR001005 -
Sto7g2557 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 69 IPR017930 -
Sto7g2557 301 PANTHER MYB TRANSCRIPTION FACTOR 9 47 - -
Sto7g2557 301 PANTHER MYB TRANSCRIPTION FACTOR 46 297 - -
Sto7g2557 301 SUPERFAMILY Homeodomain-like 12 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2557 Sto-Chr7 30820293 30821407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2557 3 297 MYB Transcription Factor Family AT5G16770 32.402 9.99e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g2557 Myb_DNA-binding 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2557 K09422 - pvy:116130625 111.309