Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2549 ATGGCCAACACACCCCTCCTCTTCCTCCGCTTCTCTGCACtacttttcttccttttctaCTCTATTTTCCCGCCATGTTTGTCACTCCCTCTGGAAACACAGGCTCTTCTGCACTTGAAGAAACACTTGAAGGACCCTTTGGATTCTTTGGCTTCATGGAATGAATCAGAATCAGACTCTCCCTGTGACTTCTACGGAATCACTTGCGATCCATTCTCCGGCAAAGTCACCAGAATTTCGCTCCAAAACAAGTCCCTCTCAGGTGTTATTTCCCCCTCTATCTCTGTTCTTCAGAGTCTGCGAGTTTTGTCTCTTCCTTTAAATTTCATCTCCGGGAAGCTTCCTTTTGAAATTAGTAACTGTAGCAACCTCAGAGTGTTGAATCTCACCGGAAATGAGATGGTTGGGGCCATTCCAGATTTCTCTGGCCTCAGGAACCTCAAGGTTCTAGACCTTTCCGCGAACTACTTCTCCGGCCGCATCCCGACCTGGATCGGAAATCTGACCGGTCTTGTTTCGCTTGGGCTCGGCGAGAATGAATACATTGAGAGTGAAATTCCGGAGACACTTGGGAATCTGAAGAACTTGACTTGGCTTTACCTTGGTGGTTCACATTTGAGAGGCGAGATTCCAGAGTCCATTTATGAGATGGAGGCTTTGGAGACACTGGATATTTCAAGAAACAAAATATCTGGAACCCTCTCGAGGTCAATTTTGAAGTTGAGAAATATTTACAAGATTGAGCTTTTCTCTAATAATTTGACCGGACAAATTCCAGTTGAGCTAGCAAACCTGACCAAACTGCAGGAGATTGACATTTCTATGAACAATATGTATGGTAGGTTGCCAGAGTTGATTGGTAGTATGAAGAACCTGGTGGTTTTTCAACTCTATGAAAACAACTTCTCTGGGGAAATTCCTTCTGGTTTTGCAGATATGCAACATCTTATTGGATTCTCAATTTATCGGAATAACTTCACTGGGACTATTCCAGAGAATTTTGGCCGATTTTCTCCACTTGAGAGTATTGACATATCAGAGAATCAGTTTTCAGGTGATTTCCCCAAGTTTTTGTGTGAAAACAACAAGTTGAGGTTTTTGCTTGCTTTGCAAAACAATTTCTCAGGTGACTTGCCTGAGTCTTATGTTACATGCAAATCTCTGGTGAGGTTTAGGATCAGCAGGAATCGCTTGTCTGGAAAAATCCCAAATGAGCTTTGGGCACTTCCATTTGTGGAAATAATTGATTTGGTTGATAATAATTTTGGTGGTGATATATCTCCGGAAATCAGGTTTTCTTCCAGCCTAAGTCAGTTATTTCTGGTGAACAACAGGTTCTCAGGTAAGCTTCCGTCAGAACTTGGGAAGTTGATGAACTTGGAGAAGCTATATTTGAGCAACAACAATTTCTCTGGTGAGATACCACCTGAAATTGGAGCTCTGAAGCAGTTATCCTCTTTGCATCTTGAAGAAAATTCATTAAGTGGGTTGATACCGGCAGAACTGGGCAATTGTGCTAGGCTGGTGGACTTGAATCTTGCTTGGAATTCTCTAACTGGCAATATCCCCCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTCAATCTTTCTGGAAATGAACTTACAGGTTCAGTTCCAAAAAGTTTAGTGTCAATGAAACTAAGCTCAATTGATTTTTCCCAAAACCAGTTTTCTGGGATGATTCCATCTGGTCTTCTAATTATTGGTGGAGACAAAGCTTTTCTTGGAAACCAGGGACTTTGTGTTGATGAAAATTCAAAAACTCTCATGAATTCTAAATTGAACACTTGTGCAAGAATACGAGGTCAGAAAAAGGTCTTTGCTGATAAAATTGTCCTGCTTTGTATCATTGCATCTGTCTTGGTTGTAATTTTGGCTGGCTTGCTCCTTGTCAACTATGGAAGCTTAAAGCAGGGTAAATCAGATGTAGAGAGAAATTTACAAAGTCAGAAGGAAGTAGATCCAAAATGGAAAATGGCATCATTCCAACATGTTGATATTGATGTGGATGAAATATGTAATTTGAATGAAGATCGTTTGATTGGAACTGGTGGTACAGGAAAGGTTTATCGAGTCGAATTAAGGAAAAATGGTTCCACAGTGGCTATAAAGCAACTATGGAAAGGAGATGGGGTAAAAATTTTGGCTGCAGAAATGGAGATTTTGGGGAAAATTAGGCATAGAAATATACTTAAGCTTTATGCTTCTTTACATAAAGGAGGATCAAACTTTTTAGTGTTGGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAGAATAAAGGTGGGAAGCCAGAGTTGGATTGGTACCGGAGGTATAAAATTGCACTGGGAACTGCAAAAGGAATTGCCTATTTACACCATGATTGTTCTCCACCTATTATTCACAGGGATATAAAGTCCAGCAACATTTTGCTTGATGAGGATTGTGAGCCAAAAATTGCTGATTTTGGTGTTGCAAAGTTTGCAGAAAAAACTGATAAGCAATTGGGTGGTAGCTGTCTTGCTGGCACTCATGGTTATATTGCTCCAGTTATACTCTTCCTTGCAGAGCTTGCTTATACACTTGAAGTCACCGAAAAGAGTGATGTATACAGCTTTGGAGTGGTGTTGTTAGAATTAGTTACTGGGAGGGAACCCATTGAAGAGGATTATGGAGATGGAAAGGATATTGTATATTGGGTTATGACTCATCTCCATGACCGTGAGAGTGTTGTCAACATGCTTGATGATAAAGTGGCATCTGAGTCTGTTGAAGATGACATGTTAAAGGTGTTGAAGATAGCTGTGCACTGCACAACTAAACTTCCATCTTTGCGTCCTACCATGAGAGAGGTTGTCAAGATGCTTATCGATGCTGACGTTTGCACGTTTCATTCTCCAGACTGCGATTTGGAGAAAGATACATAG 2943 0.4064 MANTPLLFLRFSALLFFLFYSIFPPCLSLPLETQALLHLKKHLKDPLDSLASWNESESDSPCDFYGITCDPFSGKVTRISLQNKSLSGVISPSISVLQSLRVLSLPLNFISGKLPFEISNCSNLRVLNLTGNEMVGAIPDFSGLRNLKVLDLSANYFSGRIPTWIGNLTGLVSLGLGENEYIESEIPETLGNLKNLTWLYLGGSHLRGEIPESIYEMEALETLDISRNKISGTLSRSILKLRNIYKIELFSNNLTGQIPVELANLTKLQEIDISMNNMYGRLPELIGSMKNLVVFQLYENNFSGEIPSGFADMQHLIGFSIYRNNFTGTIPENFGRFSPLESIDISENQFSGDFPKFLCENNKLRFLLALQNNFSGDLPESYVTCKSLVRFRISRNRLSGKIPNELWALPFVEIIDLVDNNFGGDISPEIRFSSSLSQLFLVNNRFSGKLPSELGKLMNLEKLYLSNNNFSGEIPPEIGALKQLSSLHLEENSLSGLIPAELGNCARLVDLNLAWNSLTGNIPQSVSLMSSLNSLNLSGNELTGSVPKSLVSMKLSSIDFSQNQFSGMIPSGLLIIGGDKAFLGNQGLCVDENSKTLMNSKLNTCARIRGQKKVFADKIVLLCIIASVLVVILAGLLLVNYGSLKQGKSDVERNLQSQKEVDPKWKMASFQHVDIDVDEICNLNEDRLIGTGGTGKVYRVELRKNGSTVAIKQLWKGDGVKILAAEMEILGKIRHRNILKLYASLHKGGSNFLVLEYMPNGNLFQALHRQNKGGKPELDWYRRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDCEPKIADFGVAKFAEKTDKQLGGSCLAGTHGYIAPVILFLAELAYTLEVTEKSDVYSFGVVLLELVTGREPIEEDYGDGKDIVYWVMTHLHDRESVVNMLDDKVASESVEDDMLKVLKIAVHCTTKLPSLRPTMREVVKMLIDADVCTFHSPDCDLEKDT 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2549 980 Pfam Protein kinase domain 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2549 980 Gene3D Ribonuclease Inhibitor 242 315 IPR032675 -
Sto7g2549 980 Gene3D Ribonuclease Inhibitor 182 241 IPR032675 -
Sto7g2549 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Sto7g2549 980 SMART serkin_6 683 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2549 980 Pfam Leucine rich repeat 145 206 IPR001611 GO:0005515
Sto7g2549 980 Gene3D Ribonuclease Inhibitor 318 599 IPR032675 -
Sto7g2549 980 SMART LRR_typ_2 217 241 IPR003591 -
Sto7g2549 980 SMART LRR_typ_2 457 480 IPR003591 -
Sto7g2549 980 SMART LRR_typ_2 529 552 IPR003591 -
Sto7g2549 980 SMART LRR_typ_2 144 168 IPR003591 -
Sto7g2549 980 SMART LRR_typ_2 481 504 IPR003591 -
Sto7g2549 980 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Sto7g2549 980 SUPERFAMILY L domain-like 58 352 - -
Sto7g2549 980 CDD STKc_IRAK 689 961 - -
Sto7g2549 980 Gene3D Phosphorylase Kinase; domain 1 666 757 - -
Sto7g2549 980 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 7 974 - -
Sto7g2549 980 SUPERFAMILY RNI-like 258 571 - -
Sto7g2549 980 ProSiteProfiles Protein kinase domain profile. 683 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2549 980 SUPERFAMILY Protein kinase-like (PK-like) 679 961 IPR011009 -
Sto7g2549 980 Gene3D Ribonuclease Inhibitor 30 181 IPR032675 -
Sto7g2549 980 Gene3D Transferase(Phosphotransferase) domain 1 758 969 - -
Sto7g2549 980 PANTHER UNNAMED PRODUCT 7 974 - -
Sto7g2549 980 Pfam Leucine Rich Repeat 459 480 IPR001611 GO:0005515
Sto7g2549 980 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515
Sto7g2549 980 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2549 Sto-Chr7 30765059 30768191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2549 13 973 Receptor kinase-like Gene Family AT1G72180 57.482 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto7g2549 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2549 - - gmx:100789704 1440.25