Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2532 ATGATTGGGCATAGGCGGTTAAACCGAGCTCGGCCCGCGAGCCCGACTACCGTTGGAAATGGATTTGGCGGTGGTGGGGCCAGAGATTCGAAGGATAGCAGCGTGGAGAAGTCGTCGAGGTTTGTACATATCCCGTCGGTTTTCAAAATGCGGAGCCTCATTTTCTTTGCGCCCTTGTATATATTTCTCATCTTATTGTTTATGGGCTCCTCGAGCATCCATTATGTTACTATCAAAAATGGTTTTGTATTTCTACACAACCGTCTTCCTCCGGGCTCAGTTTATAGGAGTCCTCAGGTTTTTGACAAGTTATGGCCCTTTATGGACGCTGAGGGCACCAATGGCACTGTAAATACGATATGTGATGCAGTTGCAGTGGCTGGCCTACTAAATGCTACTCTTCTTATTCCAATATTTCATTTCAATAGTGTTTGGAGAGACTCaagCAATTTTGGTGACATTTTTGATGAAGATTTCTTCATAAATGAGCTTGGAAACCGTGTGCATGTGGCAAGAGAACTACCCGATGACATACTTCAGAAATTTGACTATGACATAAGTAGCATTGTCAATCTTAGAGTAAAAGCTAGGTCTAGTTCAGCTTACTATCTTCGGGCTGTTCGAATTGCTCCTTTCTACAACAGATTATCTCAGTCAGTACCCTCAAAAGTCCAGAGCCTTAAATGCTTTGCCAATTTTAGAGCTCTTAGATTTTCAGAACCTATAAGAAGACTTGCAGAAATAATGGTTGATCGGATGGTTAAACATAGCTCCCAAAGTAGAGGAAAATATGTCTCAGTGCATCTTCGATTTGAGGAGGATATGATTGCATTTTCATGCTGTGAGTATGACGGTGGTGAAGAGGAGAAACATGAAATGGATATTGCTCGCGAAAGGAGTTGGCGAGGTAAATTCACAAGAAGGAACAGGGTAATAAGGCCCGGTGCAAATCGAGTGAATGGAAAATGTCCATTGACCCCCTTGGAGgtgGGAATGATGCTTAGGGGCATGGGTTTTGATAATACCACCTCAGTATATGTTGCAGCTGGAAAGATTTATAAAGAACAAAAGTACATGGCTCCCCTTAAACAGATGTTTCCACTATTACACACCAAGTACACACTGGCTACTCTAGAAGAGCTTGCCCAATTTAAGGGCTACTCTTCCAGGTTGGCTGCTCTTGATTATAATGTTTGCCTACATAGTGAAGTATATGTTACAACTCAGGGTGGAAATTTTCCGCATTTCTTGATGGGTCACAGGCGCTACATATATGGAGGGCATGCAAAGACAATTAAACCTGATAAAAGAAAATTGGCTCTATTATTAGACAGTCCTAACATAAGATGGGAAGTATTCAAGCGAGAAATGGTAGACATGCTTCTCCAAAGCGATGAACAGGGAACTGAGTTGAAATGGCCTGGTGGCTCTCTTTATACTAATCCTATGCCAGATTGCATGTGTAAACAGACAGAAGCCAGTAATGGAAATTGTACCACAAGGACATGTACTAAACTTTGCATATGGTCTCTGATTGCGGCGCGATTACCTGGTAGAACCGACAACGAGATCAAGAACTACTGGAACACTCACATAAAGCGAAAGCTCATCAGCCGAGGGATTAATCCGCAAACGCACCGTCCTCTCAATGAAAcaaccaccgccgccgccgccgtctCTGTCAATTCCTCCTCCGCCGCAACCGAGTGGGACTTCAAGGGCTCGCCGGCGACTTTTGCGCCGGGAGGAAACGACGTCGTCGTGAAGAAACAGAGTGATTATGCTGATGCTGATGGTGCTTTCAACTGCATCGATTTCGGTCCAGGATTGAAGGTGAAGAGAGAGAAGGCGGTGGTGGAAGATTTCAACTACACAAGTAGTGGCACCACGACGGAGGAAGGACCGCCATTGCGGCGAGATTCGCAAGGTGGAGGTGACGAGCCCAATCTGGAGCTCTCGATCGGTTTGGTTCCGTTTCAGGCCGAGTCGACTCGTGCGGCGCCGGGGAACTCGGCCGAGTCAACACTCGGATCGGTGGCGACGGTGGTTCAAACGGCGGCGTCTGCGACGGCGGCAATTTGTCTGTGTTGGCAGTTGGGTTCTCAGAGCGGAGAAGTGTGTAGGAACTGCCTTAAAGCTAATCGTTTCAATAATAGATTTTGCACACTTCTCAATTCTTAA 2181 0.4489 MIGHRRLNRARPASPTTVGNGFGGGGARDSKDSSVEKSSRFVHIPSVFKMRSLIFFAPLYIFLILLFMGSSSIHYVTIKNGFVFLHNRLPPGSVYRSPQVFDKLWPFMDAEGTNGTVNTICDAVAVAGLLNATLLIPIFHFNSVWRDSSNFGDIFDEDFFINELGNRVHVARELPDDILQKFDYDISSIVNLRVKARSSSAYYLRAVRIAPFYNRLSQSVPSKVQSLKCFANFRALRFSEPIRRLAEIMVDRMVKHSSQSRGKYVSVHLRFEEDMIAFSCCEYDGGEEEKHEMDIARERSWRGKFTRRNRVIRPGANRVNGKCPLTPLEVGMMLRGMGFDNTTSVYVAAGKIYKEQKYMAPLKQMFPLLHTKYTLATLEELAQFKGYSSRLAALDYNVCLHSEVYVTTQGGNFPHFLMGHRRYIYGGHAKTIKPDKRKLALLLDSPNIRWEVFKREMVDMLLQSDEQGTELKWPGGSLYTNPMPDCMCKQTEASNGNCTTRTCTKLCIWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGINPQTHRPLNETTTAAAAVSVNSSSAATEWDFKGSPATFAPGGNDVVVKKQSDYADADGAFNCIDFGPGLKVKREKAVVEDFNYTSSGTTTEEGPPLRRDSQGGGDEPNLELSIGLVPFQAESTRAAPGNSAESTLGSVATVVQTAASATAAICLCWQLGSQSGEVCRNCLKANRFNNRFCTLLNS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2532 726 CDD O-FucT_plant 120 431 IPR024709 -
Sto7g2532 726 CDD SANT 509 532 IPR001005 -
Sto7g2532 726 Pfam Myb-like DNA-binding domain 509 531 IPR001005 -
Sto7g2532 726 MobiDBLite consensus disorder prediction 624 649 - -
Sto7g2532 726 SUPERFAMILY Homeodomain-like 509 542 IPR009057 -
Sto7g2532 726 PANTHER - 113 498 IPR024709 -
Sto7g2532 726 PANTHER - 28 119 IPR024709 -
Sto7g2532 726 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 509 536 IPR017930 -
Sto7g2532 726 PANTHER O-FUCOSYLTRANSFERASE 9 113 498 - -
Sto7g2532 726 PANTHER O-FUCOSYLTRANSFERASE 9 28 119 - -
Sto7g2532 726 MobiDBLite consensus disorder prediction 1 33 - -
Sto7g2532 726 Pfam GDP-fucose protein O-fucosyltransferase 109 423 IPR019378 -
Sto7g2532 726 ProSiteProfiles Myb-like domain profile. 509 532 IPR001005 -
Sto7g2532 726 Gene3D - 489 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2532 Sto-Chr7 30644484 30651716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2532 113 490 Miscellaneous Gene Families AT1G22460 36.010 4.17e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto7g2532 O-FucT 2.2e-60 CL0113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2532 - - gmx:100798502 714.146