Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2520 ATGGCTGCACATGAAGACAGGTTCAAAGAGGAGACAGAGAAGGTGTTCAAATGGAGGTCAGCTTTGTCTCAAGTTGCCAAGTTGAAAGGATGGGAGTGGCATCCAGAAACAAGGTATGAATATGAACTTATCCATGAGATTGTGAAAGCAGTTGCTACTAAGTTCCACCGTGAACATTTATACATGGGTGAACATGTAATTGGTCACCAAGCTTGCATAGCAGAAGTGAAGTCATTGTTAGAGTTTGAATGTAGCAATACTTGTTGTATGTTGGGAATTCATGGTACTGGAGGAATCGGGAAAACAACGCTTGCCAAATCTCTCTATAACTCCATCATTGATGCTTTTGAATGTGCAGCTTTTCTTGAAAGTGGAAGTAGTAATATTGAAGGAATAATGCTTGATCCccctgaagaagaagaaatagagTGGAGTGGTACTGcatttaagaaaatgaaaaatctcAGAATTCTAATCATTCGAAAAACGCAATTTTCTGTTGCACCTAAATATCTGCCAAATAGTTTAAAGCTGCTTGAGTGGACTCATTACCCTTCACAGTCTCTCCCAGAAGGCTTTAGTCCCAGGAATATTGTTGTCCTCAATTTACGTCACAGTTGCCTCCCGTTGGAAAAGACATTGCAGATATGCAAGCATTTGACTTACTTGAATTTCTCGAGCTGCAAATTCTTAACTCATGTGCCTGATATGTCTGGAGTTGCATGTTTAAGAGAACTGAAACTCAATGGATGTGACAATCTAATTAAGATCCATGAATCTGTTGGATTTCTTAAGCAACTTGTTGCTTTAGATGCATCAAATTGCCAGGGGCTCATTAGTTTTCTACCAAAAATGTGGTTGCCATCTCTTACATCTCTTTCCCTTAAAAATTGCCAGAGACTTGAACACTTTCCAGAAATTGTAGGAGAGATGAAGAATATTTGGTTTTTAGATTTTGAAGGTAGTGGTATTAAGGCGTTGCCCCAATCTATTAGTAATCTGATAGGACTTGAAGGTTTAGGTCTGAACCGATGCAGAAACCTTAGAGATATACCATTCAGCTTCTTCATGCTACCAAATATTACCGACTTATACCTAGTAGAAACTAAAAGTTGTCAAATTCGAGATTCATTCAGAAACTTTCAAAGCAGTGACTTAGCAGCAACTAGTAGCTCTAATTTACGAAAATTGAGTTTTCGAAGAGGGGGTTTATCAGATGAAGATCTTCACGTTATTCTTAAATGTTTCCCAAAATTGGAATGCTTGTATATAGAAGAGAATGATTTTGTATCTCTCCCAGCATGCATTAAAGAATCTGTTAACCTAAGAATTCTCTATCTGAATAGATGCAAGAAGCTTCAGGAAATTCCAGAACTTCCTTCAAGTGTTGAGGCAGTATATGCACAAGATTGTCCCTTAATCTCGGACACAACAAGCATGTTATGGACCCAGATAATTACAGAGGTTCATGGATTACAAGTTGTGATGTGTGCAACAGAGATTCCAGATTGGTTTGACTATCGTTGTAAAGGAAACGTTGTGTCATTCTGGAGCCGTCAAAAGTTTCCCGTTTTTGCTGTAGCATTTGCGTTTAAGAAAGGGCAAAATGCCTATGGCTTTTTTCAAGCCGACCTGTACGTGAATGGGTACTACATACAGTGCTTAAGCCCCTTAGGAAAGTCAATTACAATTACATGGGATCATGTGATAGTGTATGATGTACGAAGCTTATTGAGAGAGAAGGAGGTTGTGATCCATGACAAATTTGTAGAACATGATTGGAATTTTGTGGAGCTTAAGGGAGTAATGTGGGACGGGGTATATGATAGTAAATGTTCATGGCCAGGGGAGTGTGGAGCATATGTGTACAGGCAGGAAACAAACATGGATGACTTTGGATTCCACTATCCCAATCATTTGGATTCCACTTTTCCATTTAGCAGAGCATCATTTGAATGGAGGAGAGGAGGGTGA 1974 0.3835 MAAHEDRFKEETEKVFKWRSALSQVAKLKGWEWHPETRYEYELIHEIVKAVATKFHREHLYMGEHVIGHQACIAEVKSLLEFECSNTCCMLGIHGTGGIGKTTLAKSLYNSIIDAFECAAFLESGSSNIEGIMLDPPEEEEIEWSGTAFKKMKNLRILIIRKTQFSVAPKYLPNSLKLLEWTHYPSQSLPEGFSPRNIVVLNLRHSCLPLEKTLQICKHLTYLNFSSCKFLTHVPDMSGVACLRELKLNGCDNLIKIHESVGFLKQLVALDASNCQGLISFLPKMWLPSLTSLSLKNCQRLEHFPEIVGEMKNIWFLDFEGSGIKALPQSISNLIGLEGLGLNRCRNLRDIPFSFFMLPNITDLYLVETKSCQIRDSFRNFQSSDLAATSSSNLRKLSFRRGGLSDEDLHVILKCFPKLECLYIEENDFVSLPACIKESVNLRILYLNRCKKLQEIPELPSSVEAVYAQDCPLISDTTSMLWTQIITEVHGLQVVMCATEIPDWFDYRCKGNVVSFWSRQKFPVFAVAFAFKKGQNAYGFFQADLYVNGYYIQCLSPLGKSITITWDHVIVYDVRSLLREKEVVIHDKFVEHDWNFVELKGVMWDGVYDSKCSWPGECGAYVYRQETNMDDFGFHYPNHLDSTFPFSRASFEWRRGG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2520 657 SUPERFAMILY L domain-like 132 476 - -
Sto7g2520 657 Gene3D Ribonuclease Inhibitor 140 311 IPR032675 -
Sto7g2520 657 PRINTS Disease resistance protein signature 90 105 - -
Sto7g2520 657 PRINTS Disease resistance protein signature 332 348 - -
Sto7g2520 657 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 125 - -
Sto7g2520 657 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 148 554 - -
Sto7g2520 657 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 125 IPR044974 GO:0006952
Sto7g2520 657 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 148 554 IPR044974 GO:0006952
Sto7g2520 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 127 IPR027417 -
Sto7g2520 657 Pfam NB-ARC domain 75 120 IPR002182 GO:0043531
Sto7g2520 657 Gene3D Ribonuclease Inhibitor 312 516 IPR032675 -
Sto7g2520 657 CDD AAA 67 160 - -
Sto7g2520 657 Gene3D - 61 139 IPR027417 -
Sto7g2520 657 Gene3D - 1 60 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2520 Sto-Chr7 30535041 30538846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2520 218 374 WRKY Transcription Factor Family AT4G12020 30.899 4.85e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2520 - - aprc:113846827 427.943