Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2511 ATGGAGGTTAGAAAGAGTAAGTTGAGAGGAGTTAGGCGTCGAAAATGGGGTAAGTGGGTATCGGAGATCCGCGTGCCGAGATCGCAGGAGCGTCTATGGTTAGGCACATACGCTACGCCGGAGGCAGCAGCCATGGCACACGACGTAGCTTTCTATTTCCTCAAGAGACCTTCTTCGACGGAGAAGCTCAACTTTCCGGCGATGTTGCCTTGTTATTGCGATGGGCGGAAGGGTGGTGGTGAGATGATGTCGCCGAGGTCGGTGCAGAAGGCGGCATCGGATGCCGGAATGGCCGTGGATGCACAGAGGAAGAGGATTGATGATGAAGCAGTGGTTGATGAGTTTGAGTGGAGTGATGATCATAGTATTAGTCatggagatggagatggaggTGATATGATTATATCCTTTGAACGATCCTTCAGTTCTATGTACCCATCAGGATGCTTCACTCCCAAATCACCACTTCTGAACCATCCACCTTTGAATGCCTCTTGTGTTTCTTTCAAATTCTTTAGATATCCATTCATCACAGTGTTTCCCCTAAACATTACTTCACCTAAGGTTTTTGCATCAGCTGTTTCTGTCAAACCATATGAATGTGTCACACTGAACCCTAGCTCTTCCATCTTGAAGAGGACCTCCGGTGGAGGCGGCGCGCCACCTGTCATCACGGATACCTTCAAAGGAAGCGGCTTCCGGACATCTGGAGGGGAATTTATGATCATGTTCAAGACTGTTGGTGCACCACCAGTGTGGGTTACCTTGTGGCGAGCAATGTTGTCGAATATTGATCGGGCGGTTACACTTCGTTGGCAGACATTCGTGCCTCCTTGGGCAGCAATTCCCCATGGGAGGCACCATCCATTGCAATGA 876 0.4852 MEVRKSKLRGVRRRKWGKWVSEIRVPRSQERLWLGTYATPEAAAMAHDVAFYFLKRPSSTEKLNFPAMLPCYCDGRKGGGEMMSPRSVQKAASDAGMAVDAQRKRIDDEAVVDEFEWSDDHSISHGDGDGGDMIISFERSFSSMYPSGCFTPKSPLLNHPPLNASCVSFKFFRYPFITVFPLNITSPKVFASAVSVKPYECVTLNPSSSILKRTSGGGGAPPVITDTFKGSGFRTSGGEFMIMFKTVGAPPVWVTLWRAMLSNIDRAVTLRWQTFVPPWAAIPHGRHHPLQ 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2511 291 ProSiteProfiles AP2/ERF domain profile. 7 66 IPR001471 GO:0003700|GO:0006355
Sto7g2511 291 CDD AP2 6 67 IPR001471 GO:0003700|GO:0006355
Sto7g2511 291 Pfam AP2 domain 6 50 IPR001471 GO:0003700|GO:0006355
Sto7g2511 291 Gene3D AP2/ERF domain 7 68 IPR036955 GO:0003700|GO:0006355
Sto7g2511 291 Coils Coil 290 291 - -
Sto7g2511 291 SMART rav1_2 7 72 IPR001471 GO:0003700|GO:0006355
Sto7g2511 291 SUPERFAMILY DNA-binding domain 6 66 IPR016177 GO:0003677
Sto7g2511 291 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Sto7g2511 291 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Sto7g2511 291 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020 4 109 - -
Sto7g2511 291 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2511 Sto-Chr7 30459478 30462501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2511 2 101 AP2-EREBP Transcription Factor Family AT1G71520 59.804 4.68e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto7g2511 AP2 3.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2511 - - zju:107421273 142.124