Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2510 ATGCCTTCCTCTTCAAGTACTAGTGGCGCTTCAACTTCCCCTTATAGAGGCGTCCGCAAGAGGAAGTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCCGGCACCAAGACCCGAATCTGGCTAGGAAGCTTCGAGACCCCCGAGATGGCGGCCGCCGCCTACGACGTCGCCGCCCTCCACTTCCGCGGCCGCGACGCCCGCCTCAACTTCCCGGAGCTCGCCCCCTCCCTCCCCCGCCCCGCCTCCAACAATGCCGACGACATCCGCATGGCGGCCCACGAGGCCGCCTTACGCCTCCGGATGACGACCACCAACACGAGCGTGGCGGCCGCAGCCGGAGGAGGAGCGGGCGGCGCGTCCGGCTCTTCATCCTCCGGTGCCGTCGGGGTGGTGCCACCGATCACCGTGAGGCTGTCTCCGACGCAGATTCAGGCCATCAATGAGTCTCCACTGGACTCGCCACCCAAGATGTGGATGCAAATGAATGAGACATTCATGCTGGAAGAACATTCTATGATGTTTGAAGATATGAGTATTGATCAGTGGGAGGATCATCATCATATGCACAGTTCGGGGCACCGCTTCTCTCGGTGTTTCCGTCCTCCTTCTCTAGATTTCCTCACTGCCTCAGATCTCACTCCTACCGTTTCACTCGGGAAACCACCGTCCTCTCATCGGCACGCTCGATTTTCCGGTGAAATGTCGGCGATCCCGAATTGTCCGCCGTGCTGCTCCGGCGCCGCGGTTAGCTCCTCGGGAAGGAGGATGAGTTGCGTGACGAATTCGTGGAGGAATTCCAAGTCCATGGCGAGGATTTTGCGGCAATCTGAGAATGACAAATTCAATGTCAGGCTTTCGGCTTCTAGCTGCCGTAGCAGGTCAGTCAAATACCCGACAATATCCATGGCATTATTGGATGAACAACTAGGATTCAAGGACAGAGTGGTCAGCCCTTCTTCTGATATATTGGCGTATGATCTAATTCAAGGGGAACTTGTGAGATGGAGTTCAGTTATGGATCGCCCTTTGCCTGATCCACCAACAGCTGTTTTTCTGCATGGGATCCTAGGCAGCAGGAAAAACTGGGGAACTTTTGCTCAGAGATTGGCAAAAGAGTTTCCCATGTGGCAGTTTCTTTTAGTTGACCTGAGATGTCATGGTAGTTCATCTTCAATCAAGAAGAGGGGCCCTCATACTGTTGCCTCTGCTGCTCATGATGTTTTGAAACTGGTTCGACAGCTAAGAATTACACCTCGTGTATTAGTTGGGCATAGTTTTGGAGGAAAAGGTTGCTTTGTTATCTCAGTTGTCTTGAGCATGGTGGACCAAGCTGCAAAACCTCTTGCTCGGCCTGTTAAAGTCTGGGTTTTGGATGCAACTCCTGGAAAGGTTAGAGCAGGAGGAGATGGAGAGGATCGCCCAGAAGAACTCATATCCTTCCTAAGTACTCTACCAAAGGAGATTTCTTCGAAGAGGGATGTCGTTAAAGCTCTCATTCAACAGGGGTTTTCCAATGACGTTGCACTGTGGGTAGTGACTAACCTGCGACCTACCAGATCTATTGGTTCACGATCATCAAGCTTCTCATGGACGTTTGACCTGAAGGGGATTGCTGAAATGTATCAATCCTATGAAGAAACAAATATGTGgaaAATTGTTGAAGATGTGCCTCGTGGTGTGCACGTGAACTTTTTGAAAGCAGAAAGAAGCCTACATAGGTGGGCTCTAGAAGATATTCAACGAATCCATGCCGCGGAGGAGCTTGCTGCTGAGGAAGGAGGTGGAGTTGAAATGCATGTGCTTGAAGATGCTGGCCATTGGGTACACGCAGATAACCCAGATGGACTCTTCAGGATACTTTCATCTTCATTCAAAACAGTCAAGACCTGA 1890 0.5185 MPSSSSTSGASTSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELAPSLPRPASNNADDIRMAAHEAALRLRMTTTNTSVAAAAGGGAGGASGSSSSGAVGVVPPITVRLSPTQIQAINESPLDSPPKMWMQMNETFMLEEHSMMFEDMSIDQWEDHHHMHSSGHRFSRCFRPPSLDFLTASDLTPTVSLGKPPSSHRHARFSGEMSAIPNCPPCCSGAAVSSSGRRMSCVTNSWRNSKSMARILRQSENDKFNVRLSASSCRSRSVKYPTISMALLDEQLGFKDRVVSPSSDILAYDLIQGELVRWSSVMDRPLPDPPTAVFLHGILGSRKNWGTFAQRLAKEFPMWQFLLVDLRCHGSSSSIKKRGPHTVASAAHDVLKLVRQLRITPRVLVGHSFGGKGCFVISVVLSMVDQAAKPLARPVKVWVLDATPGKVRAGGDGEDRPEELISFLSTLPKEISSKRDVVKALIQQGFSNDVALWVVTNLRPTRSIGSRSSSFSWTFDLKGIAEMYQSYEETNMWKIVEDVPRGVHVNFLKAERSLHRWALEDIQRIHAAEELAAEEGGGVEMHVLEDAGHWVHADNPDGLFRILSSSFKTVKT 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2510 629 Pfam Alpha/beta hydrolase family 350 617 IPR000073 -
Sto7g2510 629 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Sto7g2510 629 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Sto7g2510 629 PANTHER 2-SUCCINYL-6-HYDROXY-2,4-CYCLOHEXADIENE-1-CARBOXYLATE SYNTHASE 271 625 - -
Sto7g2510 629 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Sto7g2510 629 SUPERFAMILY DNA-binding domain 13 72 IPR016177 GO:0003677
Sto7g2510 629 Gene3D alpha/beta hydrolase 333 628 IPR029058 -
Sto7g2510 629 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Sto7g2510 629 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Sto7g2510 629 Pfam AP2 domain 15 63 IPR001471 GO:0003700|GO:0006355
Sto7g2510 629 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Sto7g2510 629 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 271 625 - -
Sto7g2510 629 SUPERFAMILY alpha/beta-Hydrolases 341 622 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2510 Sto-Chr7 30444895 30454587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2510 13 186 AP2-EREBP Transcription Factor Family AT1G71450 59.770 5.30e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto7g2510 Abhydrolase_6 3.3e-17 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2510 - - gmx:100789624 577.785