Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2506 ATGGCAGGAGAGGAGCCCAAGGCTTTGAATTATATACCAGAGGTTatcttaaagaaaagaaaaagcacTGAAGCATGGGCGTTGAGGAGAAAGGAGCAATTAGAGCAGAAGAAGTTCCAAACCAAGATGACCAACGACTATATTAAAAAACCTGAGGATTTTGTCCTAGAATATCGCAACAAGGAGATCGACCTTGTTAgaatgaaacaccggatgaagaGGAAACGACCAGCTTTGTTGATGCCGGAGTCAAAGCTGTTAGTAATCATTCGAATTCAGGGaaaAAATGACATGCATCCAAAAACACAGAAGGCCTTATACAGCTTGAGATTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGGCAAATGAGGGAATATTGGAGAAGCTTAAGATGGTCGAACCCTATGTTACCTATGGATATCCTAATCTTAAAAGCATAAAGGAGCTTATCTACAAGAAGGGACATGCAAAAATTGACAAGCAGAAAGTTCCCTTGACGGACAACAACATTATTGAACAGGAATTAGGCAAGTATGGTATTATGTGCATAGAAGACATCGTCCATGAAATTGTTAATGTTGGTAAGCACTTTAAAGAAGTTGCCAATTTCTTATGGCCCTTTGAACTCAGCAAACCAGCTGAAGGCTTGCGAGGATCGAAAATCTTATACAAAGACGGGGGAGACACAGGGAACCGAGAGGATCTGATCAACGAACTAATCATTAAAATGAATTAA 738 0.378 MAGEEPKALNYIPEVILKKRKSTEAWALRRKEQLEQKKFQTKMTNDYIKKPEDFVLEYRNKEIDLVRMKHRMKRKRPALLMPESKLLVIIRIQGKNDMHPKTQKALYSLRLRRIFSAVFVKANEGILEKLKMVEPYVTYGYPNLKSIKELIYKKGHAKIDKQKVPLTDNNIIEQELGKYGIMCIEDIVHEIVNVGKHFKEVANFLWPFELSKPAEGLRGSKILYKDGGDTGNREDLINELIIKMN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2506 245 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Sto7g2506 245 SUPERFAMILY Ribosomal protein L30p/L7e 86 245 IPR036919 -
Sto7g2506 245 Pfam Ribosomal L30 N-terminal domain 12 75 IPR012988 -
Sto7g2506 245 PANTHER 60S RIBOSOMAL PROTEIN L7-1 3 245 - -
Sto7g2506 245 PANTHER 60S RIBOSOMAL PROTEIN L7 3 245 IPR039699 -
Sto7g2506 245 TIGRFAM uL30_euk: 60S ribosomal protein uL30 13 245 IPR005998 GO:0000463|GO:0003735|GO:0022625
Sto7g2506 245 CDD Ribosomal_L7_archeal_euk 86 245 IPR035808 -
Sto7g2506 245 Gene3D - 190 245 IPR036919 -
Sto7g2506 245 Gene3D - 86 189 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2506 Sto-Chr7 30405996 30408042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2506 1 245 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 55.645 4.04e-89 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2506 K02937 - gmx:100500005 362.844